Rv1630 - c.180A>G


Drug resistance types
15 Sensitive 20 RR-TB 36 HR-TB 29 MDR-TB 7 Pre-XDR-TB 3 XDR-TB 166 Other
lineage Counts
lineage Count
lineage4.9 64
La3;lineage2.1;lineage4.9 3
lineage2.1;lineage4.9;lineage6.3 9
M.canetti;lineage2.1;lineage4.9 2
lineage4.1.2.1 14
lineage4.2.2.2 3
lineage4.1.1.1 4
lineage2.2;lineage4 1
lineage3 8
lineage4.2.1 2
lineage4.1.2 2
lineage4 3
lineage4.4 1
lineage2.2.1 17
lineage4.4.1.1 2
lineage4.3;lineage4.9 1
lineage4.6.1.2 4
lineage4.7 2
lineage2.1;lineage4.1.4;lineage4.9 1
lineage5.1.1 1
lineage4.3.3 6
La3 2
lineage4.8 14
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.8.1 2
lineage2.1;lineage4.9 14
lineage1.2.2.2 1
M.canetti;lineage2.1;lineage6.3 1
lineage2.1 5
lineage2;lineage4 1
lineage4.3.4.2.1 3
La3;lineage2.1;lineage4.9;lineage6.3 4
22
La3;lineage2.1;lineage6.3 1
lineage4.3.3;lineage4.8 3
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 2
La3;lineage1.1.2 1
lineage2.2 1
lineage2.2.1;lineage3 1
La3;lineage4.9 7
lineage2.2.1;lineage6.3 1
lineage4.1.3 2
lineage3.1 1
lineage1.1.3.2 1
lineage4.3.2 1
lineage2.2.2 2
lineage4.3.4.1 5
La3;lineage2 1
La1.2 1
La3;lineage2.2.1 1
lineage2.2.1;lineage4.9 1
lineage4.6.2.2 2
lineage4.9;lineage6.3 5
lineage2.1;lineage6.3 2
lineage1.1.2 1
lineage6.3.1 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.1.1.3 3
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2;lineage4.9 1
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
lineage3.1.1 1
lineage4.1 1
spoligotype Counts
spoligotype Count
None 276
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675275 Other lineage4.9 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR3675549 Other lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR4769493 Other lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1181256 Other lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7755655 Other lineage4.1.2.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR4769433 RR-TB lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
SRR3675214 Other lineage4.9 None
SRR16156832 RR-TB lineage2.2;lineage4 None
ERR11081864 Other lineage3 None
ERR067712 Sensitive lineage4.9 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR11342682 Other lineage4.1.2 None
SRR1173778 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
ERR2027263 Other lineage4 None
SRR16627752 RR-TB lineage4.4 None
SRR12420587 MDR-TB lineage2.2.1 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR036207 Other lineage4.3;lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR5917985 MDR-TB lineage2.2.1 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR1175052 HR-TB lineage4.9 None
SRR7645928 Other lineage4.7 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR751345 Other lineage5.1.1 None
SRR6046521 Other lineage4.4.1.1 None
ERR4814639 HR-TB lineage4.9 None
ERR4815079 RR-TB lineage3 None
SRR1172951 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR1196566 Other lineage4.9 None
ERR3276170 Other lineage4.1.2.1 nl
SRR21732980 Other lineage4.3.3 None
SRR1172885 HR-TB lineage4.9 None
SRR1172728 RR-TB La3 None
ERR11049020 Other lineage4.8 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR7236330 Other La1.8.1 None
ERR9786694 Other lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR3416776 Other lineage2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR6046594 Other lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR7131023 Other lineage4.1.2.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR108125 RR-TB lineage4.9 None
SRR1173788 Sensitive lineage4.9 None
SRR7496509 Other None
ERR9786604 Other None
SRR6789626 Other None
SRR7535086 Other None
SRR18213713 HR-TB None
SRR25827682 Other None
SRR1172857 Other None
SRR7496517 Other None
ERR9787197 Other None
SRR3675236 Other None
ERR4816999 Other None
SRR28119777 Other lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR1035157 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR212033 Other lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR1173355 Other lineage4.9 None
SRR16156804 Sensitive lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4817896 HR-TB lineage2.2.1 None
SAMEA3501073 RR-TB lineage4.8 None
ERR176549 Other lineage4.3.4.2.1 None
SRR1196677 Other lineage2.2 None
ERR3283044 Other lineage4 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR176643 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR3804169 HR-TB lineage4.1.3 None
SRR26159043 Other lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR6045219 HR-TB lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR1173400 Other lineage4.9 None
ERR4796351 Sensitive lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR7821123 Other lineage1.1.3.2 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR3797070 Other lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR11342664 MDR-TB lineage2.2.2 None
ERR176751 HR-TB lineage4.9 None
ERR978767 RR-TB lineage4.8 None
ERR4596910 Sensitive lineage4.9 None
ERR245697 Sensitive lineage4.3.4.1 mw
ERR978766 RR-TB lineage4.8 None
ERR4814352 Other lineage2.2.1 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
ERR6198317 Other La1.2 None
ERR11081258 Other lineage4.8 None
SRR10808730 Other lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR1023509 MDR-TB lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
SRR6046485 Other lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
ERR9992784 XDR-TB lineage2.2.2 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR736829 Sensitive lineage4.3.4.1 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675572 Other None
SRR1175074 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR4815604 Other None
ERR11252612 Other La3;lineage4.9 None
ERR9117709 Other None
ERR234659 HR-TB None
ERR9786444 Sensitive lineage4.8 None
SRR3675510 Sensitive La3;lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4800341 HR-TB lineage3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR6046385 Sensitive lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
SRR1175472 RR-TB lineage4.3.4.1 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR9787139 Other lineage6.3.1 None
SRR13423649 Other lineage2.2.1 None
ERR4815121 HR-TB lineage4.6.2.2 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR4821143 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1710057 Other lineage2.1 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR16156697 RR-TB lineage2.2.1 None
ERR3797069 Other lineage4.9 None
SRR18003019 Other lineage2.2.1 None
ERR11465025 Other lineage4.1.1.3 None
SRR26399973 Other La3;lineage4.9 None
ERR4817735 Other lineage4.8 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR1169194 Other lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
ERR9786569 Other lineage4.8 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR702406 Other lineage2.1 None
SRR1167384 Other La3;lineage4.9 None
SRR1173633 Other lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR1173218 Other lineage4.3.3 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR6045555 Other lineage4.9 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
ERR4815550 Other lineage2.2;lineage4.9 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR1184312 Other lineage2.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR6046066 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR502912 Other lineage2.2.1 None
ERR978765 RR-TB lineage4.8 None
ERR4798823 HR-TB lineage4 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR6785227 Other lineage2.2.1 None
SRR1173384 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496472 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR7645906 Other lineage2.2.1 None
SRR1175474 Other lineage4.9 None
SRR1196474 Other lineage3.1.1 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6785268 Sensitive lineage4.2.1 None
ERR9786421 Other lineage4.1.2.1 None
SRR1165699 Other lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR21690574 Other lineage4.1.2.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR3797062 RR-TB lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR4821276 Sensitive lineage3 None
ERR9786440 Other lineage4.1 None
ERR11466499 Other lineage4.3.4.1 None
SRR3675457 Other lineage4.9 None
SRR1172234 Other lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
SRR1165628 Other La3;lineage4.9 None
SRR1184329 Other lineage4.9 None
ERR4818347 Other lineage4.1.2 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR1196546 Other lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR502470 RR-TB lineage4.9 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR1172817 Other La3 None
ERR11465024 Other lineage4.1.1.3 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR6044855 Sensitive lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR9786617 Other lineage4.1.1.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
ERR9786671 Other None
SRR1184372 MDR-TB None
SRR28044634 Other lineage3 None
ERR4407463 HR-TB None
SRR28119805 Other lineage4.9 None
SRR1196768 MDR-TB None
ERR4817060 Other None
ERR4820151 Other lineage4.8 None
SRR1792022 Other La1.8.1 None