Rv3457c - c.-383C>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
22 Sensitive
2 RR-TB
16 HR-TB
11 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.6.2.2 | 2 |
| lineage6.3.1 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.3.4 | 1 |
| lineage2.2.1 | 3 |
| lineage3 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.9 | 24 |
| lineage4.1.2.1 | 6 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage4.8 | 2 |
| lineage4.1 | 1 |
| lineage6.1.3 | 1 |
| lineage1.2.2.2 | 1 |
| M.canetti;lineage4.9 | 3 |
| 8 | |
| lineage1.1.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La1;lineage4.9 | 1 |
| lineage4.1.2 | 2 |
| lineage2.1;lineage4.9 | 3 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.3.3;lineage4.3.4.1 | 1 |
| La3;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.6.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage5.2 | 2 |
| lineage6 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La2;lineage2.2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 88 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3804162 | Sensitive | lineage6.3.1 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4797588 | MDR-TB | lineage3 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR3675248 | Other | lineage4.9 | None | SRR29231479 | RR-TB | lineage4.9 | None | ERR3797043 | Sensitive | lineage4.9 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786440 | Other | lineage4.1 | None | ERR9787169 | Other | lineage6.1.3 | None | ERR9787223 | Sensitive | lineage6.3.1 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR4796584 | Sensitive | lineage1.2.2.2 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | SRR12416824 | HR-TB | None | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR29017081 | Sensitive | lineage4.9 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR10808730 | Other | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR9786604 | Other | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR9786508 | Sensitive | lineage4.3.3;lineage4.3.4.1 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR212123 | Other | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | ERR6358755 | Other | lineage4.6.1 | None | ERR9786617 | Other | lineage4.1.1.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR7535086 | Other | None | ERR4817893 | Other | lineage4.8 | None | ERR9117721 | HR-TB | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9787165 | Other | lineage6 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR2514692 | Other | None | ERR212001 | HR-TB | None | ERR9787197 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR12416829 | MDR-TB | lineage2.2.1 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR4769521 | RR-TB | lineage4.9 | None |
|---|
