Rv3795 - c.1626C>G
Drug resistance types
6 Sensitive
2 RR-TB
27 HR-TB
11 MDR-TB
1 Pre-XDR-TB
2 XDR-TB
101 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 30 |
| lineage2.2.1 | 5 |
| lineage4.3.2;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 3 |
| 15 | |
| lineage4.9;lineage6.3 | 3 |
| lineage4.1.2.1 | 11 |
| lineage2.1;lineage4.9 | 10 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage4.8 | 3 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La1.7;lineage4.9 | 4 |
| lineage2.1;lineage4.9;lineage6.3 | 7 |
| lineage4.1.1.3 | 2 |
| lineage1.1.2 | 1 |
| lineage4.7 | 2 |
| lineage2.1;lineage6.3 | 2 |
| La3;lineage1.1.2 | 1 |
| lineage2.2 | 2 |
| lineage4.9;lineage7 | 3 |
| lineage1.1;lineage4 | 1 |
| La1.7 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4 | 2 |
| lineage4.1.1.1 | 2 |
| lineage4.9;lineage9 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.6.2.2 | 3 |
| lineage4.1.3 | 2 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage5.2 | 2 |
| M.canetti;lineage2.2 | 2 |
| lineage4.1 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.1.2 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La3;lineage4.8 | 1 |
| lineage6.3.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.3.2 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.1;lineage4.8 | 2 |
| lineage6.1.3 | 1 |
| lineage6.1.1 | 2 |
| La3;lineage2.1;lineage4.9 | 1 |
| La3;lineage2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage2.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.8.1 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 150 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4819422 | HR-TB | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR3675572 | Other | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR9786569 | Other | lineage4.8 | None | SRR26399239 | Sensitive | lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR18213713 | HR-TB | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | ERR3797069 | Other | lineage4.9 | None | ERR4819932 | Other | lineage4.7 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR4819322 | Other | lineage1.1;lineage4 | None | ERR4830353 | Other | La1.7 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4815604 | Other | None | SRR14782054 | Other | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR2446566 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR9786617 | Other | lineage4.1.1.1 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR29096150 | Other | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR9117709 | Other | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR3675311 | Other | lineage4.9 | None | SRR7496472 | Other | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR9787197 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR9786440 | Other | lineage4.1 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR4817893 | Other | La3;lineage4.8 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | SRR3675214 | Other | lineage4.9 | None | ERR4817735 | Other | lineage4.8 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR5535933 | Other | lineage4.9 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR4816999 | Other | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | SRR3675236 | Other | None | ERR9117805 | Other | lineage4.3.2 | None | SRR7535086 | Other | None | ERR4816656 | Other | lineage4.9 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR7496509 | Other | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR3675221 | Other | lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR9786671 | Other | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR6046305 | Sensitive | lineage4.9 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR7496523 | Other | lineage4.7 | None | ERR9786604 | Other | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR3675457 | Other | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR29096410 | Other | lineage4.9 | None | ERR9787165 | Other | lineage6.1.3 | None | ERR4819241 | Other | lineage4.9 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR29097026 | Other | lineage4.9 | None | SRR3675275 | Other | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR7496517 | Other | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4820335 | Other | lineage4.1.2.1 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | SRR6789626 | Other | None | ERR2513470 | Other | lineage4.2.2.2 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR702406 | Other | lineage2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR3675549 | Other | lineage4.9 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR2229542 | Other | lineage4.8 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3804155 | Other | lineage4.1.2.1 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR9786843 | Other | None | ERR4817060 | Other | None | ERR9786421 | Other | lineage4.1.2.1 | None |
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