Rv2477c - c.1191T>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
2 Sensitive
0 RR-TB
17 HR-TB
4 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
69 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 8 |
| lineage4.9 | 18 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| lineage2.2.1 | 4 |
| 14 | |
| lineage2.1;lineage4.9 | 10 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 5 |
| lineage4 | 2 |
| lineage4.7 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1 | 1 |
| lineage6 | 1 |
| lineage1.1.2 | 1 |
| lineage4.4.1.1 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 2 |
| lineage2.2 | 1 |
| lineage4.9;lineage6.3 | 2 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage2.2.1.2 | 1 |
| La3;lineage4.9 | 1 |
| lineage2.1;lineage6.3 | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.8 | 4 |
| lineage4.1.3 | 2 |
| lineage4.6.1 | 1 |
| lineage6.3.1 | 1 |
| lineage2.1 | 1 |
| lineage4.1.1;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 93 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9786642 | Other | lineage4.1.2.1 | None | SRR3675221 | Other | lineage4.9 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR4819781 | Other | lineage2.2.1 | None | ERR9786604 | Other | None | SRR3675457 | Other | lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR18213713 | HR-TB | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR4815604 | Other | None | SRR6046046 | Other | lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR6789626 | Other | None | ERR2027263 | Other | lineage4 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4819932 | Sensitive | lineage4.7 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786440 | Other | lineage4.1 | None | SRR3675236 | Other | None | SRR12416824 | HR-TB | None | ERR9117721 | HR-TB | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9787165 | Other | lineage6 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR28119752 | Other | lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR7496472 | Other | lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3797070 | Other | lineage4.9 | None | ERR9787197 | Other | None | SRR3675572 | Other | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR29096541 | Other | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR3675275 | Other | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR6045053 | Other | lineage4 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR12015083 | Other | lineage4.8 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4800341 | Other | None | ERR4816999 | Other | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR6358755 | Other | lineage4.6.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR7535086 | Other | None | ERR4817893 | Other | lineage4.8 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR4816585 | Other | lineage2.2.1 | None | ERR702406 | Other | lineage2.1 | None | SRR6325442 | HR-TB | lineage4.1.1;lineage4.9 | None | ERR9117709 | Other | None | SRR6325447 | HR-TB | lineage4.1.1.1 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR6359082 | Other | lineage4.9 | None |
|---|
