lineage | Count |
---|---|
17 | |
lineage3 | 5 |
lineage2 | 2 |
lineage2.2.1 | 11 |
lineage4.3.2 | 1 |
lineage4 | 3 |
lineage4.6.1.1 | 1 |
lineage4.8 | 3 |
lineage1.2.1.2.1 | 3 |
lineage4.1.2.1 | 6 |
lineage4.1 | 1 |
lineage4.1.1 | 1 |
lineage6 | 1 |
La3 | 1 |
lineage4.9 | 5 |
lineage6.3;lineage2.2.1 | 1 |
lineage3;lineage2.2.1 | 1 |
lineage4.3 | 2 |
lineage4.3.3 | 1 |
lineage4.3.2.1 | 1 |
spoligotype | Count |
---|---|
None | 67 |
ID | Drug resistance | Lineage | Country iso2 | ERR4811022 | HR-TB | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4800341 | Other | lineage3 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR6866585 | Sensitive | lineage4.3.2 | None | ERR6359066 | HR-TB | lineage4 | None | ERR4811105 | HR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR9786445 | Sensitive | lineage4.8 | None | ERR736867 | HR-TB | None | SRR22249415 | Sensitive | lineage1.2.1.2.1 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786440 | Other | lineage4.1 | None | ERR9787197 | Other | None | ERR9786569 | Other | lineage4.8 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9787165 | Other | lineage6 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1169249 | Other | La3 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR10809028 | Sensitive | lineage1.2.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1169306 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR1173788 | Other | None | SRR11972331 | HR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR15368973 | Other | None | SRR20969677 | HR-TB | lineage2 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR19304036 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR25827682 | Other | None | SRR3675230 | RR-TB | lineage3 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | ERR4815709 | Sensitive | lineage4.1.2.1 | None | ERR4813049 | MDR-TB | lineage4.3 | None | ERR176643 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR2027295 | Sensitive | lineage1.2.1.2.1 | None | ERR176751 | HR-TB | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR212033 | HR-TB | None | SRR3675571 | HR-TB | None | SRR3742665 | HR-TB | None | ERR2229494 | HR-TB | lineage4.8 | None | ERR502912 | Other | lineage2.2.1 | None | SRR5341333 | HR-TB | None | ERR4817584 | MDR-TB | lineage3 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | SRR5341332 | Pre-XDR-TB | lineage3 | None | SRR6045957 | Other | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046737 | Other | lineage4.9 | None | ERR4828141 | Other | lineage4.3.3 | None | SRR6789614 | Other | lineage4.3.2.1 | None | ERR502908 | HR-TB | lineage2.2.1 | None | ERR1063855 | Other | lineage4 | None | SRR7535086 | Other | None | ERR1035157 | Other | lineage4.9 | None |
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