Rv3795 - c.1432T>C


Drug resistance types
3 Sensitive 14 RR-TB 59 HR-TB 67 MDR-TB 2 Pre-XDR-TB 3 XDR-TB 133 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9 15
lineage2.2 4
M.canetti;lineage2.1;lineage4.9 18
lineage4.9 46
lineage2.2.2 1
lineage2.2.1 9
La3;lineage4.9 2
lineage4.8 3
La1.7;lineage4.9 2
lineage4 3
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.9;lineage6.3 6
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage2.1;lineage4.9;lineage6.3 10
lineage2.1 5
lineage2.2.1;lineage3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage4.1.3 2
lineage4.6.2.2 3
lineage4.6.3;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage3.1.1 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
La1.7;M.canetti;lineage4.9 4
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage1.2.1.2 1
lineage4.3.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
M.canetti;lineage2.1;lineage6.3 2
M.canetti;lineage4.9 4
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
M.canetti;lineage2.2.2;lineage6.2 2
La3 2
lineage4.1.1.3 2
lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9 8
lineage1.1 1
La1.7.1 1
lineage4.1.2.1 8
26
La1.2.BCG 1
lineage3 2
lineage2.1;lineage6.3 2
La3;lineage4.8 1
lineage2.1;lineage2.2;lineage6.3 1
La3;lineage2.1;lineage4.9 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage2.2.1;lineage6.3 1
lineage2.1;lineage4.3.2;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
La1.7 1
lineage2.2.1.1 1
lineage1.2.2.2 1
lineage4.9;lineage9 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
M.canetti;lineage2.2 2
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.1.1.1 2
La3;lineage2.1;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
La2;lineage2.2 1
lineage4.7 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;lineage1.1.2 1
lineage4.3.4.2.1 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.1;lineage4.8 1
lineage1.1.2;lineage4.1.2.1;lineage4.1.3 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.1 1
La3;lineage2 1
lineage4.8.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage6.1.3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage6.3.1 1
spoligotype Counts
spoligotype Count
None 281
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1184388 Other lineage2.1;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR18003019 Other lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
ERR4817735 Other lineage4.8 None
ERR4817896 HR-TB lineage2.2.1 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
SRR3675214 Other lineage4.9 None
ERR3283044 Other lineage4 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR502912 Other lineage2.2.1 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3804169 HR-TB lineage4.1.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR3675248 Other lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR7496472 Other lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR1196474 Other lineage3.1.1 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR3797070 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR12006550 Other lineage1.2.1.2 None
SRR21732980 Other lineage4.3.3 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4817731 HR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675457 Other lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR1180137 RR-TB lineage2.2.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR3468607 RR-TB lineage4.9 None
ERR4815752 Other lineage4.9 None
SRR1172817 Other La3 None
ERR11465024 Other lineage4.1.1.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR4819241 Other lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
SRR6046485 Other lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR20970016 Other lineage2.2 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786642 Other lineage4.1.2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
ERR4815604 Other None
ERR9117709 Other None
ERR234659 HR-TB None
SRR25827682 Other None
SRR7496517 Other None
ERR9787197 Other None
SRR3675236 Other None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1196583 Other lineage4.9 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
ERR502908 HR-TB lineage2.2.1 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR11465025 Other lineage4.1.1.3 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR4820773 HR-TB lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
ERR702406 Other lineage2.1 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR2229084 Sensitive lineage4.8 dk
SRR6046225 Other lineage4.9;lineage6.3 None
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR6358755 Other lineage4.6.1.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6789621 Other lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1172951 Other lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1196566 Other lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4830353 HR-TB La1.7 None
ERR3804155 Other lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797046 HR-TB lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3416776 Other lineage2.1 None
ERR4769450 Other lineage4.9 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR9786617 Other lineage4.1.1.1 None
ERR4811493 HR-TB lineage4.9 None
SRR1175074 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9786604 Other None
ERR9786843 Other None
SRR1640750 RR-TB None
SRR6789626 Other None
SRR7535086 Other None
SRR18213713 HR-TB None
ERR212001 HR-TB None
ERR4816999 Other None
SRR28119777 Other lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1035157 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR4819932 Other lineage4.7 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR20969708 HR-TB lineage2.2 None
ERR176549 Other lineage4.3.4.2.1 None
SRR1196677 Other lineage2.2 None
ERR9786569 Other lineage4.8 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1180226 HR-TB lineage4.9 None
ERR990545 RR-TB lineage3 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR26159043 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1173400 Other lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR176793 Other lineage4.1.1.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
SRR3675221 Other lineage4.9 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4819877 HR-TB lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR4816100 Sensitive lineage1.1.2;lineage4.1.2.1;lineage4.1.3 None
SRR1172728 RR-TB La3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR9786440 Other lineage4.1 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR1196546 Other lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR9787165 Other lineage6.1.3 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786682 Other lineage4.1.2.1 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR7496509 Other None
ERR4818615 Sensitive None
ERR9786671 Other None
SRR1184372 MDR-TB None
ERR987722 MDR-TB None
SRR1172857 Other None
ERR4407463 HR-TB None
SRR28119805 Other lineage4.9 None
SRR1196768 MDR-TB None
ERR4817060 Other None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675441 RR-TB lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR3675549 Other lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1710057 Other lineage2.1 None