Rv0668 - c.3664_3666delTCGinsAGC


Drug resistance types
5 Sensitive 14 RR-TB 55 HR-TB 32 MDR-TB 6 Pre-XDR-TB 1 XDR-TB 108 Other
lineage Counts
lineage Count
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.9;lineage9 1
lineage4.8 4
lineage4.1.1.1 3
lineage1.1.3.2 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.9 41
La3 2
M.canetti;lineage2.1;lineage4.9 22
lineage4.3.4.1 1
lineage2.1 5
lineage2.2.1 13
lineage3 4
lineage4.4.1.1 2
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage1.1 1
lineage4.1.2.1 15
M.canetti;lineage2.1;lineage3 1
11
lineage4.9;lineage6.3 4
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.1.2 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 2
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage4.9 10
La1.7.X-unk4;lineage4.9 1
lineage2.2 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
M.canetti;lineage4.9 4
lineage2.2.1;lineage3 1
lineage4.2.2.2 1
La1.8.1 2
lineage1.2.2.2 1
lineage4 2
lineage2.2.1;lineage4.1.2.1 1
lineage2.1;lineage2.2;lineage6.3 1
lineage4.3.3 3
La1.7;lineage4.9 2
lineage2.2.2;lineage4 1
lineage1.2.1.2 1
La1.7.1 1
lineage4.1 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage4.8;lineage4.9 1
La3;lineage2.1;lineage6.3 1
lineage4.3.4.2.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 2
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 4
lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
La3;lineage2.2.1 2
La3;lineage4.9 3
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;lineage2.1;lineage4.9 2
lineage3.1 1
lineage2.2.1.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage6.1.3 1
lineage2.2.1.2 1
lineage6.3.1 1
M.canetti;lineage2.1;lineage4 1
La3;lineage2 1
La3;lineage1.1.2 1
La3;lineage2.2.2 1
M.canetti;lineage2.2 1
lineage4.1.1.3 1
lineage2.2.1;lineage6.3 1
lineage1.1.2;lineage4 1
spoligotype Counts
spoligotype Count
None 221
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR11466174 Other lineage4.8 None
ERR176793 Other lineage4.1.1.1 None
ERR7821123 Other lineage1.1.3.2 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR4819877 HR-TB lineage4.9 None
SRR1172728 RR-TB La3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR11466499 Other lineage4.3.4.1 None
SRR13837424 Sensitive lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4407452 Other lineage3 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3077978 RR-TB lineage1.1 None
SRR7131023 Other lineage4.1.2.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR1184381 MDR-TB None
SRR1173118 Other lineage2.2.1 None
SRR28119805 Other lineage4.9 None
ERR2509673 Other lineage2.2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR3470647 Other lineage3 None
SRR3675243 Other lineage4.9 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4818347 Other lineage4.1.2 None
SRR1196566 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR29050928 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1180137 Other lineage2.2.1 None
SRR1173778 Other lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
SRR1196583 Other lineage4.9 None
SRR3675507 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR1183049 RR-TB lineage2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR8665994 Other lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693228 RR-TB lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR1173384 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
ERR9786617 Other lineage4.1.1.1 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR1791696 Other La1.8.1 None
ERR4815441 HR-TB lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR9786443 Sensitive lineage4.8 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR4800341 Other lineage3 None
ERR4816478 HR-TB lineage4 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR702406 Other lineage2.1 None
ERR4816656 Other lineage4.9 None
SRR1173400 Other lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
SAMN02414850 Other lineage4.1.2.1 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675312 Sensitive lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR9787197 Other None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6789621 Other lineage4.9 None
ERR234659 Other None
SRR29093105 Other lineage2.2.2;lineage4 None
SRR12142341 HR-TB lineage2.1 None
ERR9786421 Other lineage4.1.2.1 None
SRR1184372 MDR-TB None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR7240492 HR-TB La1.7.1 None
SRR1173633 Other lineage4.9 None
ERR9786440 Other lineage4.1 None
ERR2446118 Other lineage4.1.2.1 nl
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1640750 Other None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR29051093 Other lineage4.9 None
SRR29096541 Other lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR4796577 HR-TB None
SRR1172951 Other lineage4.9 None
SRR1196768 MDR-TB None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3468607 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18003019 Other lineage2.2.1 None
SRR5535933 Other lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
ERR4821053 RR-TB lineage3 None
SRR1169194 Other lineage4.9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR1162740 Other lineage4.1.2.1 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR1184312 Other lineage2.2.1 None
ERR11138607 Pre-XDR-TB lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786444 Sensitive lineage4.8 None
ERR2027263 Other lineage4 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR26159043 Other lineage4.9 None
SRR29051077 Other lineage4.9 None
SRR6789626 Other None
ERR5917710 Other lineage4.1.2.1 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
SRR1196546 Other lineage4.9 None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6044942 HR-TB lineage4.9 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR28119777 Other lineage4.9 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR3275215 RR-TB lineage4.1.2.1 nl
SRR1172817 Other La3 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR176751 Other lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR29017461 Other La3;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
ERR5908228 RR-TB lineage4.3.3 None
SRR1184294 Other lineage4.9 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR502912 Other lineage2.2.1 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR25827682 Other None
SRR1172857 Other None
SRR28119752 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1162864 Other lineage4.1.2.1 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR3275196 Other lineage2.2.1 nl
ERR13265528 Other lineage4.9;lineage6.3 None
SRR21732980 Other lineage4.3.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR4407463 HR-TB None
ERR9787165 Other lineage6.1.3 None
ERR4819241 Other lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
ERR9787139 Other lineage6.3.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR20969677 HR-TB La3;lineage2 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1710057 Other lineage2.1 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
SRR28119741 Pre-XDR-TB lineage2.2.1 None
ERR5162090 RR-TB lineage4.9 None
SRR3416776 Other lineage2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR13245558 MDR-TB La3;lineage2.2.2 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR4816551 HR-TB lineage4.1.1.3 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
SRR29016901 Other La3;lineage4.9 None