Rv0668 - c.3664_3666delTCGinsAGC
Drug resistance types
7 Sensitive
1 RR-TB
74 HR-TB
17 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
78 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 18 |
| 77 | |
| lineage2.2.1.2 | 2 |
| lineage4.4.1.1 | 3 |
| lineage4.3.3 | 6 |
| lineage4 | 6 |
| lineage4.9 | 10 |
| lineage2.2.1 | 15 |
| lineage2.2 | 1 |
| lineage3.1 | 2 |
| lineage2 | 3 |
| lineage1.2.1.2 | 1 |
| lineage2.1 | 2 |
| La1.8.1 | 2 |
| lineage4.8 | 7 |
| lineage4.1 | 2 |
| lineage4.9;La3 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage2.2.1;La3 | 1 |
| lineage4.1.1.1 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.1.1 | 2 |
| lineage3;lineage2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.8;La3 | 2 |
| lineage4.1.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage3 | 4 |
| lineage2.2.1.1 | 1 |
| lineage1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage1.1.3.2 | 1 |
| lineage1.1.2 | 1 |
| lineage6 | 1 |
| lineage6.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 185 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1169194 | Other | None | SRR1172234 | Other | None | SRR1173118 | Other | None | SRR1172857 | MDR-TB | None | SRR1172728 | MDR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1172817 | HR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172951 | Other | None | SRR1173363 | HR-TB | None | SRR1173153 | HR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1175049 | RR-TB | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1173778 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173788 | Other | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1175090 | Other | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175074 | MDR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184294 | HR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1183049 | Other | lineage2.2 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1196494 | MDR-TB | None | SRR1184372 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196566 | HR-TB | None | SRR1196546 | HR-TB | None | SRR15368973 | Other | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR13837424 | Sensitive | lineage4.9 | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196768 | MDR-TB | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR1640750 | HR-TB | None | SRR1710057 | Other | lineage2.1 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR19304036 | HR-TB | None | SRR1791696 | Other | La1.8.1 | None | SRR25827682 | Other | None | ERR11081257 | Other | lineage4.8 | None | ERR11138607 | Pre-XDR-TB | lineage2.2.1 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR26159043 | Other | lineage4.9 | None | SRR28119741 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR26937071 | MDR-TB | lineage2.2.1;La3 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR1035239 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | SRR6325445 | HR-TB | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675486 | HR-TB | None | SRR3416776 | Other | lineage2.1 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR176751 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675558 | HR-TB | None | ERR2229542 | Other | lineage4.8 | None | SRR3675545 | HR-TB | None | ERR4817037 | Other | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR502912 | Other | lineage2.2.1 | None | SRR3742665 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4817735 | Other | lineage4.8 | None | ERR3275215 | Other | lineage4.1.2.1 | nl | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR234659 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR4818929 | HR-TB | None | ERR4818347 | Other | lineage4.1.2 | None | ERR4818394 | Other | lineage4.9 | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR2446563 | Other | lineage2.2.1 | nl | SAMN02414850 | Other | lineage4.1.2.1 | None | SRR5341302 | HR-TB | None | SRR5341333 | HR-TB | None | ERR4821053 | Other | lineage3 | None | SRR5535933 | HR-TB | None | ERR2693239 | HR-TB | None | ERR278594 | HR-TB | None | SRR6325444 | HR-TB | None | ERR2446118 | Other | lineage4.1.2.1 | nl | ERR2693227 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR3077978 | Other | lineage1.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR294248 | HR-TB | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | ERR11466174 | Other | lineage4.8 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR6789626 | Other | None | ERR502532 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323043 | HR-TB | None | ERR11488822 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | ERR11466499 | Other | lineage4.3.4.1 | None | ERR3283025 | HR-TB | None | ERR3283021 | HR-TB | None | ERR1034652 | Other | None | ERR3468544 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3470647 | Other | lineage3 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797016 | HR-TB | None | ERR4188350 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR4407463 | HR-TB | None | ERR4407452 | Sensitive | lineage3 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4796577 | MDR-TB | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4800341 | Other | lineage3 | None | ERR4811022 | HR-TB | None | ERR4810741 | HR-TB | None | ERR12015083 | Other | lineage4.8;La3 | None | ERR702406 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR4811105 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR736839 | Other | None | ERR736874 | HR-TB | None | ERR7821123 | Other | lineage1.1.3.2 | None | ERR8976043 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786443 | Sensitive | lineage4.8 | None | ERR9786440 | Other | lineage4.1 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9119669 | HR-TB | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9787165 | Other | lineage6 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9787197 | Other | None |
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