Rv3596c - c.1224T>G


Drug resistance types
63 Sensitive 7 RR-TB 129 HR-TB 15 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 103 Other
lineage Counts
lineage Count
105
lineage3 50
lineage3.1 2
lineage4.1.2.1 16
lineage4.7 2
La2 1
lineage2.2.1 20
lineage4.9 53
lineage4 15
La1 2
La1.8.1 3
lineage6.1.1 2
lineage4.1.3 2
lineage4;lineage3 3
lineage4.5;lineage3 1
lineage4.9;lineage3 1
La1.3 1
lineage2 2
lineage3.1.2 1
lineage2.2 2
lineage2.2.2 2
lineage4.3.3 2
lineage4.6.1.1 2
lineage4.3.2 1
lineage4.3.4.2.1 2
lineage4.1 2
lineage4.8 6
lineage4.1.1 2
lineage4.6.2.2 1
lineage6 1
lineage3.1.2.2;lineage3.1.2.1 1
La3 1
lineage4.5 3
lineage4.3.4 1
lineage3;lineage2.1 1
lineage4.3 1
lineage4;lineage1.1.2 1
lineage4.1.1.3 1
lineage4.4.1.1 2
lineage4;lineage1.1 1
lineage1.1 1
spoligotype Counts
spoligotype Count
None 319
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR294248 HR-TB None
ERR4817800 Sensitive lineage3 gb
ERR323034 HR-TB lineage3.1 None
SRR7535086 Other None
ERR4817149 Sensitive lineage3 gb
ERR5311090 HR-TB None
SRR7131023 Other lineage4.1.2.1 None
SRR7496523 Other lineage4.7 None
ERR502524 HR-TB La2 None
ERR502532 HR-TB None
ERR5311099 HR-TB None
ERR5311081 HR-TB None
SRR7496471 Sensitive None
SRR7496509 Other None
SRR7496517 Other None
ERR323038 HR-TB None
ERR323041 HR-TB None
ERR323039 HR-TB None
ERR323055 HR-TB None
ERR323043 HR-TB None
ERR323053 HR-TB None
ERR323063 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR114454 Sensitive lineage3 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR1034652 Other None
ERR2512390 Sensitive lineage3 gb
ERR1034634 HR-TB None
ERR1035157 Other lineage4.9 None
ERR1063855 Other lineage4 None
ERR3283017 HR-TB None
ERR3283010 Other La1 None
ERR2513212 Sensitive lineage3 gb
ERR3283013 MDR-TB lineage4 None
ERR3283043 Other lineage4.9 None
ERR3283027 HR-TB None
ERR330724 Sensitive lineage3 None
ERR3283036 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3283055 HR-TB None
ERR3468544 HR-TB None
ERR3445504 HR-TB None
ERR369157 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR351877 Sensitive lineage3 None
ERR369151 Sensitive lineage4.9 None
ERR3797016 HR-TB None
ERR3797036 HR-TB None
ERR3797023 HR-TB La1.8.1 None
ERR3797046 HR-TB None
ERR3797069 Other None
ERR3797062 RR-TB lineage4.9 None
ERR3797071 Other lineage4.9 None
ERR3797058 Other lineage4.9 None
ERR3797083 HR-TB None
ERR3797081 Sensitive lineage4 None
ERR3804155 Other lineage4.1.2.1 None
ERR3799304 Other lineage6.1.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR386809 Sensitive lineage3 None
ERR403415 Sensitive lineage4;lineage3 None
ERR387051 HR-TB None
ERR2514043 Sensitive lineage3 gb
ERR403411 Sensitive lineage4.5;lineage3 None
ERR4187734 Other La1.8.1 None
ERR403410 Sensitive lineage4.9;lineage3 None
ERR4188350 HR-TB None
ERR4188247 HR-TB None
ERR4195479 Sensitive lineage3 None
ERR4195794 Sensitive lineage3 None
ERR4596902 HR-TB lineage3 None
ERR4596910 Sensitive lineage4 None
ERR473334 HR-TB lineage4.9 None
ERR473303 Sensitive lineage4.9 None
ERR4796577 MDR-TB None
ERR473367 Sensitive lineage4.9 None
ERR4769450 HR-TB None
ERR4769551 Other La1.3 None
ERR4769452 HR-TB None
ERR2514351 Sensitive lineage3 gb
ERR4797054 Pre-XDR-TB lineage2 None
ERR2514297 Sensitive lineage3 gb
ERR4797588 MDR-TB lineage3 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4798262 HR-TB La1 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4798823 HR-TB lineage4 None
ERR4799513 HR-TB lineage2.2 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR4799547 Sensitive lineage2.2.1 None
ERR4800341 Other lineage3 None
ERR11049861 Other lineage3 None
ERR4808964 RR-TB lineage2.2.1 None
ERR5336148 Other None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR736831 HR-TB lineage4.9 None
ERR6359066 HR-TB lineage4 None
ERR6359070 Other lineage4.9 None
ERR702406 HR-TB None
ERR5908228 Other lineage4.3.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR6358837 HR-TB None
ERR6358991 HR-TB None
ERR6359045 HR-TB None
ERR6359069 Other lineage4.9 None
ERR7821163 Other lineage2.2.1 None
ERR736839 Other None
ERR736848 HR-TB None
ERR736865 HR-TB None
ERR736867 HR-TB None
SRR21733338 Sensitive lineage3 None
ERR772255 MDR-TB lineage4.3.2 None
ERR176549 Other lineage4.3.4.2.1 None
ERR9117709 HR-TB None
ERR8976043 HR-TB None
ERR9786077 Sensitive lineage3 None
ERR9119096 Other lineage4.3.3 None
ERR9121160 Sensitive lineage3 None
ERR9121393 Sensitive lineage3 None
ERR9125829 Other lineage3 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786440 Other lineage4.1 None
ERR9786569 Other lineage4.8 None
ERR9786604 Other None
ERR9786617 Other lineage4.1.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786671 Other None
ERR9786642 Other lineage4.1.2.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR9787014 Other lineage6.1.1 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR9787165 Other lineage6 None
ERR987722 HR-TB None
ERR9787197 Other None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR069981 HR-TB lineage2.2.2 None
SRR069989 HR-TB lineage2 None
SRR1049674 HR-TB lineage2.2.1 None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
ERR987733 RR-TB lineage4.6.1.1 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR1140724 HR-TB lineage2.2.1 None
SRR1167384 Other lineage4 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1172310 HR-TB None
SRR1169249 Other La3 None
SRR1169306 Other None
SRR1172885 HR-TB lineage4.9 None
SRR13837630 Sensitive lineage4.9 None
SRR1174897 HR-TB None
SRR12416824 HR-TB None
SRR13423649 Sensitive lineage2.2.1 None
SRR13837566 Other lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR13861261 Sensitive lineage4.9 None
SRR13861153 Other lineage4.9 None
SRR13861288 Other lineage4.9 None
SRR13861304 Other lineage4.9 None
SRR13861305 Other lineage4.9 None
SRR13861381 MDR-TB lineage4.9 None
SRR13861372 Other lineage4.9 None
SRR13861332 Other lineage4.9 None
SRR13861510 Other lineage4.9 None
SRR13861424 RR-TB lineage4.9 None
SRR13861413 Sensitive lineage4.9 None
SRR13861415 Other lineage4.9 None
SRR13861434 RR-TB lineage4.9 None
SRR20632814 Sensitive lineage4 None
SRR1640750 HR-TB None
SRR17658565 Other lineage3 None
SRR17832802 HR-TB lineage3 None
SRR18213810 Sensitive lineage3 None
SRR13861629 RR-TB lineage4.9 None
SRR16057939 Other lineage3 None
SRR18213713 HR-TB lineage4.5 None
SRR19303884 HR-TB None
SRR21677886 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
ERR11067894 Other lineage3 None
ERR11068014 MDR-TB lineage3 None
ERR11082137 Sensitive lineage3 None
SRR22251893 Sensitive lineage3 None
ERR11082986 Sensitive lineage3 None
SRR22250061 Other lineage3 None
SRR27450387 Sensitive lineage3 None
ERR176751 HR-TB None
SRR3675464 HR-TB lineage4.1 None
SRR3675465 HR-TB None
ERR176793 Other lineage4.1.1 None
ERR4815604 HR-TB None
SRR3675482 HR-TB None
ERR161033 HR-TB None
SRR6046099 Sensitive lineage3 gb
ERR4814352 HR-TB lineage2.2.1 None
SRR3675486 HR-TB None
ERR161034 Other lineage4.3.4.2.1 None
ERR161039 Sensitive lineage4.3.4 None
ERR4814536 MDR-TB lineage3;lineage2.1 None
SRR3675232 Other lineage4.1.2.1 None
ERR181744 HR-TB None
ERR4815471 Other lineage4.9 None
SRR3675236 HR-TB None
SRR3675221 HR-TB None
ERR176568 Other lineage4.3 None
SRR3675280 HR-TB lineage4.9 None
SRR3675312 HR-TB lineage4 None
SRR3675284 HR-TB lineage4.9 None
SRR3675311 Other None
ERR176643 HR-TB None
SRR3675383 HR-TB None
ERR176740 HR-TB None
SRR3675456 HR-TB None
ERR4816964 Other lineage4.9 None
SRR3675510 Other None
SRR3675545 HR-TB None
ERR2229542 Other lineage4.8 None
ERR4816999 Other None
ERR4816151 Other lineage4.8 None
ERR2027263 Other lineage4 None
SRR3675555 HR-TB None
ERR212001 HR-TB None
ERR212034 HR-TB None
ERR212033 HR-TB None
ERR4817060 RR-TB None
SRR3675572 Other None
SRR3675558 HR-TB None
ERR212123 Other None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR4816470 Other lineage3 None
ERR4816548 MDR-TB lineage4.5 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR4816585 Other lineage2.2 None
ERR4816656 HR-TB None
ERR212121 HR-TB None
ERR4817121 Sensitive lineage3 None
ERR4817667 HR-TB lineage4.8 None
ERR4817735 Other lineage4.8 None
ERR4818710 Sensitive lineage4.9 None
ERR4818021 Other La1.8.1 None
ERR4818929 HR-TB None
ERR3275196 Other lineage2.2.1 nl
ERR245716 Sensitive lineage2.2.1 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR2509673 Other lineage2.2.1 None
ERR4818607 Sensitive lineage4.9 None
ERR4819280 Sensitive lineage4 None
ERR4818615 Other None
SRR5007188 Other lineage4 None
ERR4820335 Other lineage4.1.2.1 None
ERR4819322 Other lineage4;lineage1.1 None
SRR2100770 Sensitive lineage3 None
ERR4819357 Other lineage4.9 None
ERR553100 Sensitive lineage3 de
ERR2514327 HR-TB lineage4.8 None
ERR4820854 Other lineage4.1.2.1 None
SRR2100815 Sensitive lineage4;lineage3 None
SRR5341456 Other None
ERR4819932 Other lineage4.7 None
SRR5341330 HR-TB None
SRR2101215 Sensitive lineage3 None
ERR4819781 Other lineage2.2.1 None
ERR4819933 Other lineage4.9 None
SRR5341333 HR-TB None
SRR2101162 Sensitive lineage3 None
SRR2100303 Sensitive lineage3 None
SRR5341470 HR-TB None
ERR2693238 HR-TB lineage4.9 None
ERR2446563 Other lineage2.2.1 nl
ERR4821053 Other lineage3 None
SRR6045555 HR-TB None
ERR266609 Sensitive lineage4;lineage3 None
ERR2693239 HR-TB None
ERR266554 Sensitive lineage3 None
SRR6044790 HR-TB None
SRR6046141 Other lineage4.9 None
SRR6045832 HR-TB lineage4.9 None
SRR6045002 MDR-TB lineage4.9 None
SRR6044855 Other lineage4.9 None
SRR6046133 HR-TB None
SRR6045952 HR-TB None
SRR6046066 HR-TB None
SRR6046020 Other lineage3 None
SRR6045191 Sensitive lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR6045217 Other lineage4 None
SRR6046305 Other lineage4.9 None
SRR6325442 HR-TB None
SRR6046299 HR-TB None
SRR6325444 HR-TB None
SRR6046382 HR-TB lineage2.2.1 None
ERR278594 HR-TB None
SRR6046376 Other lineage3 None
ERR2851356 Sensitive lineage4.9 None
ERR4798645 Sensitive lineage3 in
SRR6046514 HR-TB None
SRR6046594 HR-TB lineage4 None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046540 HR-TB None
SRR6325448 HR-TB None
SRR6325447 HR-TB None
SRR6458421 MDR-TB lineage2.2.1 None
ERR4814367 Sensitive lineage3 gb
ERR323036 HR-TB None
ERR4816561 Sensitive lineage3 gb
ERR484739 Sensitive lineage3 None
ERR323037 HR-TB lineage4 None
ERR3077978 Other lineage1.1 None
SRR6789626 Other None
ERR485006 HR-TB lineage4.9 None
SRR6964605 Other lineage3 None