Rv3795 - c.1461C>G
Drug resistance types
1 Sensitive
13 RR-TB
29 HR-TB
71 MDR-TB
3 Pre-XDR-TB
3 XDR-TB
122 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2 | 1 |
| lineage4.8 | 6 |
| lineage2.1;lineage4.9;lineage6.3 | 10 |
| M.canetti;lineage2.1;lineage4.9 | 22 |
| lineage2.1 | 5 |
| M.canetti;lineage4.9 | 1 |
| lineage4.9 | 32 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.6.1.1 | 1 |
| lineage4.1.2.1 | 10 |
| lineage2.1;lineage4.9 | 16 |
| La1.8.1 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 6 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 4 |
| lineage3.1 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| lineage1.1.3.2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 5 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage4.1 | 1 |
| lineage2.2.1 | 8 |
| lineage1.2.2.2 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | 1 |
| La3 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9 | 10 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| lineage1.1 | 1 |
| La1.7.1 | 1 |
| lineage4.7 | 2 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| lineage4.9;lineage6.3 | 4 |
| 23 | |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| lineage6.3.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage1.1.2 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage3 | 3 |
| lineage2.2.1;lineage3 | 1 |
| lineage4 | 1 |
| lineage4.1;lineage4.8 | 2 |
| La3;lineage4.9 | 2 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage4.1.3 | 2 |
| lineage4.1.1.1 | 2 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;lineage2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| La1;lineage4.1.2 | 1 |
| M.canetti;lineage2.1 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| M.canetti;lineage2.2 | 2 |
| lineage4.6.2.2 | 1 |
| La3;lineage4.8 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 2 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.2 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage4.4.1.1 | 1 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| lineage4.3.3 | 1 |
| lineage6.1.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| lineage4.9.1 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| La1.7;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 242 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1196677 | Other | lineage2.2 | None | ERR9786569 | Other | lineage4.8 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675561 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | SRR3675487 | MDR-TB | M.canetti;lineage4.9 | None | SRR3675214 | Other | lineage4.9 | None | ERR5311089 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR3797016 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9786627 | Other | lineage4.1.2.1 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | ERR3797023 | MDR-TB | La1.8.1 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675486 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR5311096 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675248 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR7496472 | Other | lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR6325442 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR7821123 | Other | lineage1.1.3.2 | None | SRR1172951 | Other | lineage4.9 | None | ERR126600 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR1196566 | Other | lineage4.9 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR11466174 | Other | lineage4.8 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR9786440 | Other | lineage4.1 | None | SRR3675457 | Other | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | SRR1196546 | Other | lineage4.9 | None | ERR2229542 | Other | lineage4.8 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR3416776 | Other | lineage2.1 | None | ERR3283017 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | None | ERR4188350 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1172817 | Other | La3 | None | ERR126608 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR9786601 | Other | lineage4.1.2.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675508 | MDR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR5311083 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR3077978 | RR-TB | lineage1.1 | None | SRR7240492 | MDR-TB | La1.7.1 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR7496523 | Other | lineage4.7 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR3675568 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SRR3675554 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR1184381 | MDR-TB | None | ERR9786671 | Other | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR9786604 | Other | None | ERR9117709 | Other | None | SRR6789626 | Other | None | ERR234659 | HR-TB | None | SRR7535086 | Other | None | SRR7496517 | Other | None | ERR4407463 | HR-TB | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR6325445 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | SRR18003019 | Other | lineage2.2.1 | None | ERR4817735 | Other | lineage4.8 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR3797083 | RR-TB | lineage4.9 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR323063 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR2229084 | Sensitive | lineage4.8 | dk | ERR990545 | RR-TB | lineage3 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR15368973 | Other | lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR323047 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675506 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR3283016 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | ERR2229143 | RR-TB | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR3675450 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR323041 | MDR-TB | M.canetti;lineage2.1 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3468607 | RR-TB | lineage4.9 | None | ERR4815752 | Other | lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | SRR3675515 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786617 | Other | lineage4.1.1.1 | None | SRR1175074 | Other | None | ERR4815604 | Other | None | ERR9786843 | Other | None | SRR18213713 | HR-TB | None | SRR25827682 | Other | None | SRR28119777 | Other | lineage4.9 | None | ERR323040 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1035157 | Other | lineage4.9 | None | ERR278594 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4800341 | HR-TB | lineage3 | None | ERR4817893 | Other | La3;lineage4.8 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR502908 | HR-TB | lineage2.2.1 | None | ERR8976043 | MDR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR1710057 | Other | lineage2.1 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR3675322 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR1169194 | Other | lineage4.9 | None | ERR5311098 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6325448 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR3675545 | RR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675444 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR323060 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR502912 | Other | lineage2.2.1 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR386953 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR26159043 | Other | lineage4.9 | None | ERR038268 | MDR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | SRR1173400 | Other | lineage4.9 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR323058 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675221 | Other | lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1184294 | Other | lineage4.9 | None | ERR6358837 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR21690574 | Other | lineage4.1.2.1 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9787165 | Other | lineage6.1.3 | None | SRR6045952 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR3675464 | MDR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR323038 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR7496509 | Other | None | SRR3675572 | Other | None | SRR1640750 | RR-TB | None | SRR1184372 | MDR-TB | None | ERR9787197 | Other | None | SRR3675236 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR4816999 | Other | None | SRR1196768 | MDR-TB | None | ERR4817060 | Other | None | SRR1196583 | Other | lineage4.9 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR3675275 | Other | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR3675549 | Other | lineage4.9 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR245758 | Other | lineage4.9.1 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR124652 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4819932 | Other | lineage4.7 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675558 | MDR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | SRR3675501 | Other | La1.7;lineage4.9 | None |
|---|
