lineage | Count |
---|---|
lineage4.5 | 1 |
lineage2.2.1 | 4 |
56 | |
lineage2.2 | 5 |
lineage4.9;lineage4.6.3 | 1 |
lineage4 | 10 |
La1.8.1 | 1 |
lineage4.9 | 2 |
La2 | 1 |
lineage4.1.2 | 1 |
lineage4.7 | 1 |
lineage4.1.2.1 | 7 |
lineage6.1.1 | 2 |
lineage4.1.3 | 2 |
lineage2 | 1 |
lineage3.1.2 | 1 |
lineage1.1.2 | 1 |
lineage4.8 | 1 |
lineage4.1 | 1 |
lineage4.6.2.2 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage6 | 1 |
lineage6.3.1 | 1 |
lineage2.2.1.1 | 1 |
spoligotype | Count |
---|---|
None | 104 |
ID | Drug resistance | Lineage | Country iso2 | SRR18213713 | HR-TB | lineage4.5 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR19303884 | HR-TB | None | SRR20970016 | Other | lineage2.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR4818615 | Other | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR3675465 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | ERR176740 | HR-TB | None | ERR4815604 | HR-TB | None | SRR3675311 | Other | None | ERR2027263 | Other | lineage4 | None | SRR3675572 | Other | None | SRR3675574 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | SRR7496472 | Other | None | ERR4818021 | Other | La1.8.1 | None | SRR5341455 | Sensitive | lineage4 | None | SRR6045503 | HR-TB | None | SRR5341470 | HR-TB | None | ERR2515228 | Other | lineage2.2.1 | None | SRR6044855 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6046225 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046397 | Other | None | SRR6046540 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6511621 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR502524 | HR-TB | La2 | None | SRR6789626 | Other | None | SRR6982365 | Other | lineage2.2.1 | None | ERR502532 | HR-TB | None | ERR323043 | HR-TB | None | SRR7496517 | Other | None | SRR9970980 | Other | lineage4.1.2 | None | ERR323039 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | ERR133825 | Sensitive | lineage4 | None | ERR323053 | HR-TB | None | ERR1035122 | Sensitive | None | ERR1063896 | Sensitive | None | ERR3283027 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3797069 | Other | None | ERR3283040 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4024991 | Other | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR6359045 | HR-TB | None | ERR4811493 | HR-TB | None | ERR5336148 | Other | None | ERR702406 | HR-TB | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR736865 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR736867 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9117709 | HR-TB | None | ERR9786569 | Other | lineage4.8 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786440 | Other | lineage4.1 | None | ERR9786604 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9787197 | Other | None | ERR987722 | HR-TB | None | ERR9786671 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9787165 | Other | lineage6 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR10808805 | Sensitive | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR12416824 | HR-TB | None |
---|