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SRA data
Rv3793
- c.1683T>C
Drug resistance types
5 Sensitive
6 RR-TB
37 HR-TB
25 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
93 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
17
17
M.canetti;lineage2.1;lineage4.9
16
lineage2.1;lineage4.9
14
lineage4.1.2.1
9
lineage2.1;lineage4.9;lineage6.3
8
lineage2.2.1
6
La3;lineage2.1;lineage4.9;lineage6.3
4
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
4
M.canetti;lineage2.1;lineage4.9;lineage6.3
4
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
168
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1035138
MDR-TB
lineage2.1;lineage4.9
None
ERR1334034
Other
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
None
ERR176793
Other
lineage4.1.1.1
None
ERR2027263
Other
lineage4
None
ERR234659
Other
None
ERR2514692
Other
None
ERR3077978
RR-TB
lineage1.1
None
ERR323043
Other
lineage2.1;lineage4.9
None
ERR3283019
Other
lineage2.1;lineage4.9
None
ERR3283027
Other
lineage2.1;lineage4.9;lineage6.3
None
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