Rv3601c - c.-628_-627delCTinsTC
Drug resistance types
0 Sensitive
1 RR-TB
13 HR-TB
1 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
42 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1 | 2 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.9 | 4 |
| 6 | |
| lineage4.8 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.1.2.1 | 5 |
| lineage2.1;lineage4.9 | 2 |
| La3;lineage2.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.9;lineage6.3 | 4 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage6.3.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| La3;lineage2 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage4.9 | 7 |
| lineage4 | 1 |
| lineage2.2.1 | 1 |
| lineage3 | 1 |
| lineage4.1.3 | 2 |
| La3;lineage4.8 | 1 |
| lineage4.6.2.2 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| La3;lineage1.1.2 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 58 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR4407463 | HR-TB | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786569 | Other | lineage4.8 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR9786627 | Other | lineage4.1.2.1 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR6789626 | Other | None | SRR29055629 | MDR-TB | La3;lineage2.2.1 | None | SRR29017461 | Other | La3;lineage4.9 | None | SRR7496509 | Other | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR9787197 | Other | None | ERR11465024 | Other | lineage4.1.1.3 | None | ERR9786604 | Other | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR28119753 | Other | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR29093909 | Other | lineage4.9 | None | ERR4800341 | Other | lineage3 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR28119777 | Other | lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR12015083 | Other | La3;lineage4.8 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR7496472 | Other | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | SRR28119805 | Other | lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR29016901 | Other | La3;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR3675248 | Other | lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3804169 | HR-TB | lineage4.1.3 | None |
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