Rv0668 - c.33C>G
Drug resistance types
13 Sensitive
4 RR-TB
129 HR-TB
17 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
105 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 22 |
| 111 | |
| lineage4.8 | 7 |
| lineage2.2.1;La3 | 1 |
| lineage4.9;La3 | 1 |
| lineage4.9 | 36 |
| lineage4.1 | 1 |
| lineage4.3.3 | 7 |
| lineage4.1.1.1 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage4.1.1 | 2 |
| lineage2.2.1 | 12 |
| lineage2.1 | 3 |
| lineage4.3.4 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.1.2.1 | 20 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 1 |
| lineage1.1 | 2 |
| La1.8.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.8;La3 | 2 |
| lineage2.2 | 3 |
| lineage4;lineage1.1.2 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage4.7 | 1 |
| lineage3 | 3 |
| lineage4.3.4.2.1 | 4 |
| lineage3.1 | 4 |
| lineage4.2.1 | 1 |
| La1 | 1 |
| lineage4.1.3 | 2 |
| lineage4;lineage3.1 | 1 |
| lineage2 | 3 |
| lineage1.2.2.2 | 1 |
| lineage1.1.2 | 2 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.2 | 2 |
| lineage1.1.3.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage2.2.2 | 2 |
| lineage6.3.1 | 1 |
| lineage4.4.1.1 | 3 |
| lineage1.2.1.2.1 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 277 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR22424765 | MDR-TB | lineage4 | None | SRR6325445 | HR-TB | None | ERR11081258 | Other | lineage4.8 | None | SRR26937071 | MDR-TB | lineage2.2.1;La3 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR26159043 | Other | lineage4.9 | None | ERR4815604 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR11081257 | Other | lineage4.8 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | ERR176793 | Other | lineage4.1.1 | None | ERR2229084 | Sensitive | lineage4.8 | dk | ERR1035239 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675465 | HR-TB | None | ERR161033 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3416776 | Other | lineage2.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675236 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675221 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675383 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR4816100 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | ERR4816999 | Other | None | ERR4816127 | Sensitive | lineage1.1 | None | ERR4817060 | RR-TB | None | SRR3675545 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212123 | Other | None | SRR3675558 | HR-TB | None | ERR4818021 | Other | La1.8.1 | None | ERR212138 | HR-TB | lineage4 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR3675572 | Other | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4817735 | Other | lineage4.8 | None | SRR7496472 | Other | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR4818615 | Other | None | ERR2229143 | Other | lineage4.1.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR234659 | HR-TB | None | ERR4818394 | Other | lineage4.9 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5007188 | Other | lineage4 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4819462 | Other | lineage4 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819932 | Other | lineage4.7 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341313 | HR-TB | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341302 | HR-TB | None | ERR278594 | HR-TB | None | SRR5341315 | Sensitive | None | SRR5341330 | HR-TB | None | ERR4821053 | Other | lineage3 | None | SRR5341333 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR2693239 | HR-TB | None | SRR6044790 | HR-TB | None | ERR4822104 | RR-TB | lineage3 | None | SRR6045832 | HR-TB | lineage4.9 | None | ERR4822268 | Other | lineage4.8 | None | SRR6046141 | Other | lineage4.9 | None | SRR6046066 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6325444 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | SRR6046514 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR323034 | HR-TB | lineage3.1 | None | SRR6789626 | Other | None | ERR294248 | HR-TB | None | SRR6785268 | Sensitive | lineage4.2.1 | None | SRR6785413 | Other | lineage2.2.1 | None | SRR6831950 | Other | lineage4.3.3 | None | ERR502908 | HR-TB | lineage2.2.1 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR323036 | HR-TB | None | ERR502532 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7496517 | Other | None | SRR8217918 | HR-TB | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR323038 | HR-TB | None | SRR7496509 | Other | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323041 | HR-TB | None | ERR323043 | HR-TB | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR1035157 | Other | lineage4.9 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR11049020 | Other | lineage4.8 | None | ERR1063857 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR3283017 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283027 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283021 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3797058 | Other | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3797016 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR3797069 | Other | None | ERR3797083 | HR-TB | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4407463 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188350 | HR-TB | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769521 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR12015083 | Other | lineage4.8;La3 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800341 | Other | lineage3 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6359066 | HR-TB | lineage4 | None | ERR4811105 | HR-TB | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6358837 | HR-TB | None | ERR6358951 | HR-TB | lineage4 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR5336148 | Other | None | ERR5908228 | Other | lineage4.3.3 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR702406 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR736837 | Other | lineage4.9 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7821123 | Other | lineage1.1.3.2 | None | ERR8976043 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9119669 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9786604 | Other | None | ERR9786569 | Other | lineage4.8 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | SRR069981 | HR-TB | lineage2.2.2 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9787197 | Other | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR1172817 | HR-TB | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1172728 | MDR-TB | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1169194 | Other | None | SRR1172234 | Other | None | SRR1172857 | MDR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1173153 | HR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173363 | HR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173166 | Other | lineage4.9 | None | SRR1173400 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1173629 | Other | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173484 | Other | lineage4 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1173706 | Other | lineage4.9 | None | SRR1175049 | RR-TB | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1184388 | Other | None | SRR1184294 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1175074 | MDR-TB | None | SRR1175090 | Other | lineage4.9 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | SRR12142341 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196768 | MDR-TB | None | SRR1196566 | HR-TB | None | SRR13837514 | Sensitive | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR13837642 | RR-TB | lineage4.9 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR1710057 | Other | lineage2.1 | None | SRR15368973 | Other | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR1640750 | HR-TB | None | SRR19303884 | HR-TB | None | SRR1791696 | Other | La1.8.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR20969677 | HR-TB | lineage2 | None | SRR19304036 | HR-TB | None | SRR25827682 | Other | None |
|---|
