Rv0006 - c.372G>A
Drug resistance types
12 Sensitive
2 RR-TB
20 HR-TB
7 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
42 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 7 |
| lineage2.2 | 2 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| 3 | |
| lineage3 | 2 |
| lineage6.1.3 | 1 |
| lineage4.9 | 26 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.1.1.1 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage3.1 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 2 |
| M.canetti;lineage2.2 | 2 |
| lineage4.1 | 1 |
| lineage1.2.2.2 | 3 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.8 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.3.2.1 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage2.2.1 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| lineage6.3.1 | 1 |
| lineage4.1.2 | 1 |
| La1.8.1 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.4.1.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.6.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 85 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR3804155 | Other | lineage4.1.2.1 | None |
| SRR20970016 | Other | lineage2.2 | None |
| SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
| ERR9787197 | Other | None | |
| SRR17832802 | HR-TB | lineage3 | None |
| ERR9787165 | Other | lineage6.1.3 | None |
| ERR9786682 | Other | lineage4.1.2.1 | None |
| ERR9786627 | Other | lineage4.1.2.1 | None |
| ERR4188247 | HR-TB | lineage4.9 | None |
| SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
| SRR6045053 | Other | lineage4 | None |
| ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| ERR4798099 | Other | lineage4.9 | None |
| SRR6046133 | HR-TB | lineage4.9 | None |
| SRR6045219 | HR-TB | lineage4.9 | None |
| ERR9786617 | Other | lineage4.1.1.1 | None |
| ERR4769450 | Other | lineage4.9 | None |
| SRR6046720 | HR-TB | lineage4.9;lineage9 | None |
| SRR6511621 | Sensitive | lineage4.9 | None |
| SRR28351442 | HR-TB | lineage3.1 | None |
| ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None |
| SRR6046225 | Other | lineage4.9;lineage6.3 | None |
| ERR9786642 | Other | lineage4.1.2.1 | None |
| ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None |
| ERR9786421 | Other | lineage4.1.2.1 | None |
| ERR4797474 | Sensitive | lineage4.9 | None |
| ERR9786440 | Other | lineage4.1 | None |
| ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None |
| SRR28044973 | Sensitive | lineage1.2.2.2 | None |
| ERR502524 | HR-TB | lineage4.9;lineage6.3 | None |
| SRR26112287 | Sensitive | lineage1.2.2.2 | None |
| ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None |
| ERR9786569 | Other | lineage4.8 | None |
| ERR3797029 | Other | lineage4.9 | None |
| ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None |
| SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None |
| SRR3675270 | Other | lineage4.9 | None |
| ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| ERR6358755 | Other | lineage4.6.1.1 | None |
| ERR736817 | HR-TB | lineage4.3.4 | None |
| ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None |
| SRR6046046 | Other | lineage4.9 | None |
| SRR6045347 | Other | lineage4.9 | None |
| ERR4797588 | MDR-TB | lineage3 | None |
| ERR1063846 | HR-TB | lineage4.9 | None |
| SRR9970981 | RR-TB | lineage4.3.2.1 | None |
| SRR29231479 | RR-TB | lineage4.9 | None |
| SRR6045399 | Other | M.canetti;lineage4.9 | None |
| SRR9970979 | Sensitive | lineage4.8 | None |
| ERR323043 | Other | lineage2.1;lineage4.9 | None |
| ERR4769452 | Other | lineage4.9 | None |
| ERR4798493 | MDR-TB | lineage2.2.1 | None |
| SRR11662690 | HR-TB | lineage4.9 | None |
| ERR4797264 | Sensitive | lineage4.9 | None |
| ERR9786601 | Other | lineage4.1.2.1 | None |
| ERR9786671 | Other | None | |
| ERR736875 | HR-TB | lineage4.9 | None |
| ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None |
| SRR6045555 | Other | lineage4.9 | None |
| ERR9786604 | Other | None | |
| SRR6046878 | Other | lineage4.9 | None |
| SRR3675510 | Sensitive | La3;lineage4.9 | None |
| ERR9786694 | Other | lineage4.1.2.1 | None |
| SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
| ERR9787139 | Other | lineage6.3.1 | None |
| SRR9970980 | HR-TB | lineage4.1.2 | None |
| SRR1791747 | Other | La1.8.1 | None |
| SRR20969708 | HR-TB | lineage2.2 | None |
| SRR20969731 | Other | lineage2.2.1 | None |
| SRR12882726 | Sensitive | lineage1.2.2.2 | None |
| SRR6046593 | Other | lineage4.9 | None |
| SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None |
| ERR4797184 | Sensitive | lineage4.9 | None |
| SRR12416842 | HR-TB | lineage4.9 | None |
| ERR6866639 | Other | lineage4.9 | None |
| SRR6046594 | Sensitive | lineage4.9 | None |
| ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None |
| ERR2660539 | Other | lineage4.9 | None |
| ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None |
| ERR4816559 | MDR-TB | lineage4.4.1.1 | None |
| SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None |
| ERR9786645 | Other | lineage4.6.2.2 | None |
| SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None |
| SRR3675585 | Sensitive | lineage4.9 | None |
