Rv0486 - c.318G>A
Drug resistance types
2 Sensitive
3 RR-TB
14 HR-TB
4 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
54 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9 | 12 |
| La1.2.BCG;La1.8.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.9 | 11 |
| 16 | |
| La3;lineage2.1;lineage4.9 | 1 |
| La2;lineage2.2 | 1 |
| lineage4.1.3 | 2 |
| lineage4.8 | 2 |
| lineage6.3.1 | 1 |
| lineage4.1.2.1 | 3 |
| La3 | 1 |
| lineage2.2.1 | 6 |
| lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage2.1;lineage6.3 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage2.1 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.7 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La2;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage3.1;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 78 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR3675275 | Other | lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR4815604 | Other | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR4811105 | HR-TB | None | SRR6789626 | Other | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR9786569 | Other | lineage4.8 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR3675236 | Other | None | ERR9786627 | Other | lineage4.1.2.1 | None | SRR1172728 | RR-TB | La3 | None | ERR9117709 | Other | None | SRR1184381 | MDR-TB | None | SRR3675221 | Other | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR4407463 | HR-TB | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR18213713 | HR-TB | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4810741 | HR-TB | None | ERR4811142 | RR-TB | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR20969677 | HR-TB | lineage2.1 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR7496509 | Other | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3797070 | Other | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1196583 | Other | lineage4.9 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR2514390 | Sensitive | lineage3.1;lineage4.9 | None | ERR4816999 | Other | None | ERR4811075 | Other | None | ERR4811311 | Other | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | ERR4817893 | Other | lineage4.8 | None | SRR18003019 | Other | lineage2.2.1 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4816585 | Other | lineage2.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR1173400 | Other | lineage4.9 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR3675311 | Other | lineage4.9 | None | SRR7496472 | Other | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | ERR9787197 | Other | None | SRR6789621 | Other | lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None |
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