Rv2477c - c.105T>C


Drug resistance types
7 Sensitive 8 RR-TB 56 HR-TB 22 MDR-TB 5 Pre-XDR-TB 2 XDR-TB 125 Other
lineage Counts
lineage Count
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.1.2.1 10
lineage4.3.4.1 3
lineage2.1;lineage4.9 14
La3;lineage2 1
lineage4.1.2 1
lineage4.9 52
M.canetti;lineage2.1;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 9
lineage4.2;lineage4.6.3;lineage4.9.1 1
lineage4.6.2.2 2
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.7 2
M.canetti;lineage4.9;lineage9 1
lineage4.9;lineage6.3 6
17
lineage1.1.2 1
La1.7;lineage4.9 7
lineage3 4
lineage2.2 2
lineage6.3.1 1
La1.7.X-unk4;lineage4.9 1
lineage2.2.1.1 1
lineage2.1;lineage6.3 2
La3;lineage1.1.2 1
lineage2.1 5
La2;lineage4.9 2
lineage3.1.2.1;lineage3.1.2.2 1
lineage4 3
La1.2;La1.8.1 1
lineage4.1.3 2
lineage1;lineage4.9 1
lineage3.1.2.2 1
lineage4.1.1.1 3
lineage4.3.2;lineage4.9 1
lineage4.9;lineage7 1
La3;lineage4.9 2
La2;lineage4.9;lineage9 1
La3 2
lineage2.2.1 7
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.8.1 1
lineage4.4.1.2 1
lineage4.6.3;lineage4.9 2
La1.2.BCG 1
M.canetti;lineage4.9 3
lineage3.1.2.1;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage4.9 2
lineage1.1.2;lineage2.2.1;lineage3.1.2.1 1
lineage2.2.1;lineage3 1
lineage4.2.2.2 1
La3;lineage4.3.4 1
lineage4.9;lineage9 3
La1.7;M.canetti;lineage4.9 4
lineage4.3.3 1
lineage4.8 2
La1.7 2
lineage4.2;lineage4.6.3;lineage4.9 1
La3;lineage2.2.1 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La2;lineage2.2 1
lineage4.3.4.2.1 1
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
lineage2.2.1;lineage6.3 1
lineage4.4.1.1 1
lineage3.1 1
M.canetti;lineage1 1
lineage3.1.1 1
La1.7.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 225
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR9786694 Other lineage4.1.2.1 None
ERR11466499 Other lineage4.3.4.1 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
ERR4818347 Other lineage4.1.2 None
SRR1196546 Other lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR4815752 Other lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR9786645 Other lineage4.6.2.2 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496523 Other lineage4.7 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR4815604 Other None
ERR9117709 Other None
SRR6789626 Other None
SRR25827682 Other None
SRR3675236 Other None
ERR11082350 MDR-TB lineage4.6.2.2 None
SRR21733183 RR-TB lineage1.1.2 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR4810624 MDR-TB lineage2.2 None
ERR9787139 Other lineage6.3.1 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR4819932 Other lineage4.7 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR702406 Other lineage2.1 None
SRR6046305 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR17832802 HR-TB lineage3 None
ERR2027263 Other lineage4 None
SRR1173706 Other lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR3675461 RR-TB lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR3804169 HR-TB lineage4.1.3 None
SRR26159043 Other lineage4.9 None
SRR6789621 Other lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR181744 HR-TB La3;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR1172951 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR1196566 Other lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR1172728 RR-TB La3 None
ERR4814352 Other lineage2.2.1 None
SRR8217918 HR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4819781 Other lineage2.2.1 None
SRR1172234 Other lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR9786601 Other lineage4.1.2.1 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR161037 HR-TB lineage4.9 None
ERR9786671 Other None
SRR1175074 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR1172857 Other None
SRR28119805 Other lineage4.9 None
ERR4817060 Other None
SRR1196583 Other lineage4.9 None
ERR1035157 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR3675385 Other La1.7;lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR2514390 Sensitive lineage3.1.2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
SRR1173355 Other lineage4.9 None
SRR1169194 Other lineage4.9 None
ERR4798504 RR-TB lineage3 None
ERR4820773 HR-TB lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR1173633 Other lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
SRR25827489 XDR-TB lineage1.1.2;lineage2.2.1;lineage3.1.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR1173778 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR502912 Other lineage2.2.1 None
ERR2513470 Other lineage4.2.2.2 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR1173400 Other lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR1063849 HR-TB lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675221 Other lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR1165699 Other lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR4817731 HR-TB lineage4.9 None
ERR2446570 Sensitive lineage4.8 nl
ERR4830353 HR-TB La1.7 None
ERR3804155 Other lineage4.1.2.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675222 Other La1.7 None
SRR10808730 Other lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR3416776 Other lineage2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1172817 Other La3 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR4819422 HR-TB lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR9786617 Other lineage4.1.1.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675572 Other None
SRR1184381 MDR-TB None
SRR28351341 Other lineage4.1.1.1 None
ERR9786604 Other None
SRR7535086 Other None
SRR18213713 HR-TB None
ERR987722 MDR-TB None
ERR4816999 Other None
SRR1196768 MDR-TB None
SRR28119777 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675275 Other lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
SRR1710057 Other lineage2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR3797069 Other lineage4.9 None
ERR3275201 Sensitive lineage4.8 nl
ERR4817896 HR-TB lineage2.2.1 None
ERR176549 Other lineage4.3.4.2.1 None
SRR1196677 Other lineage2.2 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797015 HR-TB lineage4.9 None
SRR3675214 Other lineage4.9 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR3283044 Other lineage4 None
SRR1180226 HR-TB lineage4.9 None
SRR1184312 Other lineage2.2.1 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR6358755 Other lineage4.6.1.1 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3283030 HR-TB lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR15014655 Other M.canetti;lineage1 None
SRR7496472 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR1196474 Other lineage3.1.1 None
ERR3797070 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675488 Other La1.7;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816656 Other lineage4.9 None