EBG00000313325 - n.200T>A
Drug resistance types
32 Sensitive
6 RR-TB
16 HR-TB
8 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
88 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage6.3 | 7 |
| lineage4.1.1.2 | 41 |
| lineage4.1.2.1 | 9 |
| lineage4.9 | 21 |
| lineage4.3.3 | 2 |
| lineage4.1.1.1 | 2 |
| lineage2.1;lineage4.9 | 9 |
| lineage6.1.3 | 1 |
| 10 | |
| lineage6.3.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage2.1 | 4 |
| lineage2.2.1 | 4 |
| lineage1.1.2 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage2.1;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage2.2.1;lineage6.3 | 1 |
| La3;lineage2.2.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.1.3 | 2 |
| La3;lineage4.8 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;lineage2 | 1 |
| La3;lineage2.2.2 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.8 | 3 |
| La3 | 2 |
| lineage4.4.1.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.6.1.1 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage4 | 1 |
| lineage2.2.2;lineage4 | 1 |
| lineage2.2.1;lineage4.1.1.2 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage3.1 | 1 |
| lineage4.6.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 153 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR2660482 | Sensitive | lineage4.1.1.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR4815752 | Other | lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | ERR2660531 | Sensitive | lineage4.1.1.2 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR9787165 | Other | lineage6.1.3 | None | SRR1196768 | MDR-TB | None | ERR1633867 | Sensitive | lineage4.1.1.2 | za | SRR1196583 | Other | lineage4.9 | None | ERR495091 | Sensitive | lineage4.1.1.2 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1710057 | Other | lineage2.1 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | ERR4814653 | Sensitive | lineage4.1.1.2 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR7496517 | Other | None | ERR10748423 | MDR-TB | lineage4.1.1.2 | None | SRR1184312 | Other | lineage2.2.1 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR10610225 | RR-TB | lineage4.1.1.2 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR9992987 | Other | lineage4.1.1.2 | None | SRR29055629 | MDR-TB | La3;lineage2.2.1 | None | ERR13260449 | Sensitive | lineage4.1.1.2 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR29093909 | Other | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | SRR1165699 | Other | lineage4.9 | None | ERR11465025 | Other | lineage4.1.1.3 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR6982088 | Other | lineage4.1.1.2 | None | ERR12015083 | Other | La3;lineage4.8 | None | SRR28119752 | Other | lineage4.9 | None | SRR29016780 | Other | lineage4.9 | None | SRR3675311 | Other | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR9806711 | RR-TB | lineage4.1.1.2 | None | ERR4814743 | Sensitive | lineage4.1.1.2 | None | SRR1184381 | MDR-TB | None | SRR6789621 | Other | lineage4.9 | None | ERR1023504 | Sensitive | lineage4.1.1.2 | None | ERR4814809 | Sensitive | lineage4.1.1.2 | gb | ERR4821233 | Sensitive | lineage4.1.1.2 | gb | ERR4821350 | Sensitive | lineage4.1.1.2 | gb | ERR8699728 | Sensitive | lineage4.1.1.2 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR1196566 | Other | lineage4.9 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR1173778 | Other | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR10315621 | RR-TB | lineage4.1.1.2 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1169194 | Other | lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR11465349 | Sensitive | lineage4.1.1.2 | None | SRR1173384 | Other | lineage4.9 | None | ERR11465350 | Sensitive | lineage4.1.1.2 | None | SRR29050859 | Other | lineage4.9 | None | SRR6789626 | Other | None | ERR1035048 | HR-TB | lineage4.1.1.2 | za | ERR9786515 | Other | lineage4.1.2.1 | None | ERR13245558 | MDR-TB | La3;lineage2.2.2 | None | SRR1196546 | Other | lineage4.9 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR29017461 | Other | La3;lineage4.9 | None | ERR11049020 | Other | lineage4.8 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR28119777 | Other | lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | SRR10869070 | Sensitive | lineage4.1.1.2 | None | SRR3675549 | Other | lineage4.9 | None | SRR1172817 | Other | La3 | None | SRR1173400 | Other | lineage4.9 | None | SRR7496509 | Other | None | SRR6981949 | Sensitive | lineage4.1.1.2 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR1167166 | Sensitive | lineage4.1.1.2 | None | ERR279560 | Sensitive | lineage4.1.1.2 | None | SRR29093223 | Sensitive | lineage4.1.1.2 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR1034922 | Sensitive | lineage4.1.1.2 | za | SRR7496472 | Other | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | SAMN02403449 | Sensitive | lineage4.1.1.2 | za | SRR28119805 | Other | lineage4.9 | None | ERR11465024 | Other | lineage4.1.1.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | SRR2100030 | Sensitive | lineage4.1.1.2 | None | SRR2101536 | Sensitive | lineage4.1.1.2 | None | ERR4809146 | Sensitive | lineage4.1.1.2 | za | ERR9786604 | Other | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR1165224 | Sensitive | lineage4.1.1.2 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR10610346 | RR-TB | lineage4.1.1.2 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR22249938 | Sensitive | lineage4.1.1.2 | None | ERR11465875 | Sensitive | lineage4.1.1.2 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR3416776 | Other | lineage2.1 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | ERR2027263 | Other | lineage4 | None | ERR9992698 | Other | lineage4.1.1.2 | None | SRR28119753 | Other | lineage4.9 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR13260817 | Sensitive | lineage2.2.1;lineage4.1.1.2 | None | SRR1173206 | Sensitive | lineage4.1.1.2 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR7535086 | Other | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR11081258 | Other | lineage4.8 | None | SRR1172728 | RR-TB | La3 | None | ERR13267017 | Pre-XDR-TB | lineage2.2.1 | None | ERR7821196 | Sensitive | lineage4.1.1.2 | None | ERR8975401 | Sensitive | lineage4.1.1.2 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR1175346 | Sensitive | lineage4.1.1.2 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR29093818 | HR-TB | lineage4.1.1.2 | None | SRR1184346 | HR-TB | lineage3.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR1172857 | Other | None | ERR9787197 | Other | None | ERR9786671 | Other | None | SRR12142341 | HR-TB | lineage2.1 | None |
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