Rv0529 - c.-330G>C


Drug resistance types
1 Sensitive 1 RR-TB 21 HR-TB 8 MDR-TB 2 Pre-XDR-TB 1 XDR-TB 75 Other
lineage Counts
lineage Count
lineage4.9 15
15
lineage3 2
La3;lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage4.9 2
lineage4.7 1
La3;lineage1.1.2 1
lineage2.1;lineage4.9;lineage6.3 8
lineage2.1 3
lineage2.1;lineage4.9 11
lineage4 1
lineage4.1.3 2
lineage1.1.2;lineage4.1.2.1;lineage4.1.3 1
lineage2.2.1 3
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.1.1.1 3
La3;lineage2.1;lineage6.3 1
lineage2.1;lineage6.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage6.3.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.9;lineage6.3 4
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage2.2.1;lineage6.3 1
lineage4.4.1.1 2
lineage4.1.2.1 4
M.canetti;lineage4.9 2
lineage6.1.3 1
lineage4.6.2.2 1
La1.7;lineage4.9 1
La3;lineage4.8 1
La3;M.canetti;lineage2.2.1 1
La3;lineage4.9 1
lineage4.8 1
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
lineage2.2.1;lineage3 1
lineage3.1.2.2 1
lineage4.3.2 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;lineage2 1
M.canetti;lineage2.1;lineage6.3 1
spoligotype Counts
spoligotype Count
None 109
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR28119805 Other lineage4.9 None
ERR4816999 Other None
ERR4817060 Other None
SRR3675275 Other lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR3804169 HR-TB lineage4.1.3 None
SRR26159043 Other lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184294 Other lineage4.9 None
ERR4816100 Sensitive lineage1.1.2;lineage4.1.2.1;lineage4.1.3 None
ERR4814352 Other lineage2.2.1 None
ERR3283042 HR-TB lineage4.9 None
SRR3675457 Other lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR9786617 Other lineage4.1.1.1 None
ERR9117709 Other None
ERR234659 HR-TB None
SRR28044634 Other lineage3 None
SRR3675236 Other None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9787139 Other lineage6.3.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR702406 Other lineage2.1 None
SRR3675214 Other lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6789621 Other lineage4.9 None
SRR7496472 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR6046521 Other lineage4.4.1.1 None
ERR176793 Other lineage4.1.1.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675221 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR9787165 Other lineage6.1.3 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR9786682 Other lineage4.1.2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9786604 Other None
ERR4815604 Other None
SRR1184372 MDR-TB None
ERR9787197 Other None
SRR28119777 Other lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4817893 Other La3;lineage4.8 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797069 Other lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
SRR1169194 Other lineage4.9 None
ERR9786569 Other lineage4.8 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9117805 Other lineage4.3.2 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3283018 HR-TB lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
SRR1184381 MDR-TB None
ERR9786671 Other None
SRR6789626 Other None
SRR18213713 HR-TB None
SRR25827682 Other None
ERR4407463 HR-TB None