EBG00000313339 - n.2557G>A


Drug resistance types
13 Sensitive 2 RR-TB 27 HR-TB 23 MDR-TB 10 Pre-XDR-TB 0 XDR-TB 137 Other
lineage Counts
lineage Count
lineage2.2.1 70
lineage4.9 32
lineage4.6.1.2 2
lineage3.1.1 1
lineage4.2.2 6
lineage4.2.1 1
La1.3 1
lineage4.3.3 4
lineage4.8 2
lineage4.1.3 2
lineage2.1;lineage4.9 7
lineage4.3.2.1 2
lineage4.3.3;lineage4.3.4.2 1
lineage4.1.1.3 2
lineage2.1;lineage4.9;lineage6.3 5
lineage4.1.2.1 10
lineage4.9;lineage6.3 5
11
lineage4.1.1.1 3
La3;lineage2.1;lineage6.3 1
lineage1.1.2 2
lineage1.2.2.2 2
lineage4.3.4.1 1
La3;lineage2.1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage2.2 1
lineage4 3
lineage4.6.1.1 1
lineage2.2.1;lineage6.3 1
lineage4.5 2
La3 2
M.canetti;lineage2.1;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La3;lineage2 1
lineage4.8.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage6.3 1
La3;lineage3 1
La3;lineage2.1;lineage4.9;lineage6.3 3
M.canetti;lineage4.9 1
La1.6 1
lineage6.1.3 1
lineage4.3.2 2
La3;lineage4.8 1
lineage4.9;lineage9 1
lineage4.4.2 1
La1.8.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage6.3.1 1
La3;M.canetti;lineage2.2.1 1
lineage2.2.2 1
lineage2.1 1
lineage3.1 1
spoligotype Counts
spoligotype Count
None 212
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6785227 Other lineage2.2.1 None
SRR1173384 Other lineage4.9 None
ERR6358728 MDR-TB lineage4.6.1.2 None
SRR16295780 Other lineage2.2.1 None
SRR16295824 Other lineage2.2.1 None
SRR16295763 Other lineage2.2.1 None
SRR1196474 Other lineage3.1.1 None
ERR3559275 HR-TB lineage4.2.2 None
SRR16295798 Other lineage2.2.1 None
ERR3797070 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR6807688 Pre-XDR-TB lineage4.2.1 None
SRR16295812 Other lineage2.2.1 None
SRR1196566 Other lineage4.9 None
SRR13423629 MDR-TB lineage2.2.1 None
ERR4769546 Other La1.3 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR11049020 Other lineage4.8 None
ERR9786611 HR-TB lineage4.1.3 None
ERR2307498 HR-TB lineage2.2.1 None
SRR6824572 MDR-TB lineage2.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR10869302 MDR-TB lineage4.3.2.1 None
ERR1034911 MDR-TB lineage4.3.3;lineage4.3.4.2 pt
SRR16295791 Other lineage2.2.1 None
ERR2600574 MDR-TB lineage2.2.1 None
SRR12416840 MDR-TB lineage4.9 None
ERR4815752 Other lineage4.9 None
ERR3559282 HR-TB lineage4.2.2 None
ERR11465024 Other lineage4.1.1.3 None
SRR16295760 Other lineage2.2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR16295790 Other lineage2.2.1 None
SRR6982349 Sensitive lineage2.2.1 None
SRR7131023 Other lineage4.1.2.1 None
SRR16295737 Other lineage2.2.1 None
ERR1035300 HR-TB lineage4.1.2.1 br
SRR16295792 Other lineage2.2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
SRR28351341 Other lineage4.1.1.1 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR1184372 MDR-TB None
SRR6789626 Other None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR12199409 Other lineage1.2.2.2 None
SRR3675549 Other lineage4.9 None
SRR6785413 Other lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR16295769 Other lineage2.2.1 None
ERR1034907 Pre-XDR-TB lineage4.3.4.1 pt
ERR2693227 Sensitive lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR16295813 Other lineage2.2.1 None
ERR3797069 Other lineage4.9 None
ERR11465025 Other lineage4.1.1.3 None
SRR16295772 Other lineage2.2.1 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR1173355 Other lineage4.9 None
SRR12416829 MDR-TB lineage2.2.1 None
ERR4817896 HR-TB lineage2.2.1 None
SRR1169194 Other lineage4.9 None
SRR1196677 Other lineage2.2 None
SRR1173633 Other lineage4.9 None
SRR16295783 Other lineage2.2.1 None
ERR3283044 Other lineage4 None
SRR16295746 Other lineage2.2.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR3559276 HR-TB lineage4.2.2 None
SRR16295750 Other lineage2.2.1 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3804169 HR-TB lineage4.1.3 None
SRR6789621 Other lineage4.9 None
SRR11972188 MDR-TB lineage2.2.1 None
SRR7496472 Other lineage4.9 None
SRR1172951 Other lineage4.9 None
ERR2179695 Sensitive lineage4.5 None
SRR21732980 Other lineage4.3.3 None
SRR16295816 Other lineage2.2.1 None
SRR21690574 Other lineage4.1.2.1 None
SRR16295821 Other lineage2.2.1 None
SRR1172728 RR-TB La3 None
ERR4814352 Other lineage2.2.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR21737226 Sensitive lineage4.5 None
ERR9786694 Other lineage4.1.2.1 None
SRR1172234 Other lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR16295779 Other lineage2.2.1 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR1173484 Sensitive lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR2600577 Pre-XDR-TB lineage2.2.1 None
SRR16295793 Other lineage2.2.1 None
SRR16295830 Other lineage2.2.1 None
ERR9786617 Other lineage4.1.1.1 None
SRR16295775 Other lineage2.2.1 None
SRR7496509 Other None
SRR1175074 Other None
SRR1173363 Other None
SRR7535086 Other None
SRR28119777 Other lineage4.9 None
SRR16295809 Other lineage2.2.1 None
SRR1196583 Other lineage4.9 None
SRR16295825 Other lineage2.2.1 None
SRR16295788 Other lineage2.2.1 None
ERR2660545 Sensitive lineage4.3.2.1 None
SRR16295741 Other lineage2.2.1 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR502908 HR-TB lineage2.2.1 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR16295752 Other lineage2.2.1 None
ERR2124083 HR-TB lineage4.6.1.2 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR1023302 MDR-TB La3;lineage3 None
SRR10869292 Pre-XDR-TB lineage2.2.1 None
SRR16295771 Other lineage2.2.1 None
ERR11138607 Pre-XDR-TB lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR16295811 Other lineage2.2.1 None
SRR3675232 Other lineage4.1.2.1 None
SRR16295801 Other lineage2.2.1 None
SRR1173118 Other lineage2.2.1 None
SRR1173400 Other lineage4.9 None
SRR10993944 Other La1.6 None
SRR16295787 Other lineage2.2.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3559283 HR-TB lineage4.2.2 None
SRR3675248 Other lineage4.9 None
SRR16295770 Other lineage2.2.1 None
SRR16295777 Other lineage2.2.1 None
SRR16295814 Other lineage2.2.1 None
ERR1334032 Other lineage6.1.3 None
SRR16295819 Other lineage2.2.1 None
ERR4820854 Other lineage4.1.2.1 None
SRR6785301 Sensitive lineage2.2.1 None
SRR16295807 Other lineage2.2.1 None
SRR16295766 Other lineage2.2.1 None
SRR16295810 Other lineage2.2.1 None
ERR1213875 Sensitive lineage4.3.3 de
ERR1213930 Other lineage4.3.2 pe
SRR1173153 Other lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR16295806 Other lineage2.2.1 None
ERR9786421 Other lineage4.1.2.1 None
SRR1165699 Other lineage4.9 None
SRR16295818 Other lineage2.2.1 None
SRR16295829 Other lineage2.2.1 None
ERR12015083 Other La3;lineage4.8 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR17406750 Other lineage1.1.2 None
SRR1196546 Other lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR28119741 Pre-XDR-TB lineage2.2.1 None
SRR1172817 Other La3 None
SRR3675311 Other lineage4.9 None
SRR6824603 Sensitive lineage4.4.2 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR10482948 Other La1.8.1 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786682 Other lineage4.1.2.1 None
SRR1173788 Sensitive lineage4.9 None
SRR16295743 Other lineage2.2.1 None
SRR28409573 Sensitive lineage1.2.2.2 None
SRR1172857 Other None
SRR7496517 Other None
ERR4407463 HR-TB None
SRR28119805 Other lineage4.9 None
SRR1196768 MDR-TB None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR9787139 Other lineage6.3.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR2600576 Pre-XDR-TB lineage2.2.1 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR16295738 Other lineage2.2.1 None
SRR16295828 Other lineage2.2.1 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR18003019 Other lineage2.2.1 None
ERR3132168 MDR-TB lineage4.3.2 None
ERR3559287 HR-TB lineage4.2.2 None
ERR9786498 Sensitive lineage4.1.2.1 None
ERR1035295 MDR-TB lineage4.1.2.1 br
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR3559281 HR-TB lineage4.2.2 None
SRR16295744 Other lineage2.2.1 None
SRR16295808 Other lineage2.2.1 None
SRR1184312 Other lineage2.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
SRR1173778 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR1173706 Other lineage4.9 None
SRR16295826 Other lineage2.2.1 None
ERR2179850 Sensitive lineage4 None
SRR1184346 HR-TB lineage3.1 None