EBG00000313339 - n.2557G>A
Drug resistance types
13 Sensitive
2 RR-TB
27 HR-TB
23 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
137 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 70 |
| lineage4.4.2 | 1 |
| lineage4.9;lineage6.3 | 5 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.1.1.1 | 3 |
| lineage4.9 | 32 |
| 11 | |
| lineage1.2.2.2 | 2 |
| lineage2.1;lineage4.9 | 7 |
| lineage6.3.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 5 |
| lineage4.3.4.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.6.1.2 | 2 |
| lineage4.2.2 | 6 |
| lineage2.2 | 1 |
| lineage4.1.2.1 | 10 |
| La3;lineage3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage4.6.1.1 | 1 |
| lineage2.1 | 1 |
| lineage4 | 3 |
| lineage4.1.3 | 2 |
| La1.6 | 1 |
| lineage4.3.3 | 4 |
| lineage4.8 | 2 |
| lineage4.5 | 2 |
| La3;lineage2 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.3.3;lineage4.3.4.2 | 1 |
| lineage4.9;lineage9 | 1 |
| La3 | 2 |
| La1.8.1 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage1.1.2 | 2 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage2.1;lineage6.3 | 1 |
| lineage4.3.2 | 2 |
| M.canetti;lineage4.9 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage3.1 | 1 |
| lineage6.1.3 | 1 |
| lineage3.1.1 | 1 |
| lineage4.2.1 | 1 |
| La1.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La3;lineage4.8 | 1 |
| lineage4.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 212 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR16295790 | Other | lineage2.2.1 | None | SRR6824603 | Sensitive | lineage4.4.2 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR16295792 | Other | lineage2.2.1 | None | SRR1173788 | Sensitive | lineage4.9 | None | SRR7496509 | Other | None | SRR28409573 | Sensitive | lineage1.2.2.2 | None | SRR1175074 | Other | None | SRR28351341 | Other | lineage4.1.1.1 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR1173363 | Other | None | SRR7535086 | Other | None | SRR16295741 | Other | lineage2.2.1 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR12199409 | Other | lineage1.2.2.2 | None | SRR3675549 | Other | lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR6785413 | Other | lineage2.2.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR2600576 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR1034907 | Pre-XDR-TB | lineage4.3.4.1 | pt | ERR2693227 | Sensitive | lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR16295752 | Other | lineage2.2.1 | None | SRR16295813 | Other | lineage2.2.1 | None | ERR3797069 | Other | lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | ERR11465025 | Other | lineage4.1.1.3 | None | SRR16295772 | Other | lineage2.2.1 | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR3559287 | HR-TB | lineage4.2.2 | None | SRR1196677 | Other | lineage2.2 | None | SRR1173633 | Other | lineage4.9 | None | ERR1035295 | MDR-TB | lineage4.1.2.1 | br | ERR1023302 | MDR-TB | La3;lineage3 | None | SRR10869292 | Pre-XDR-TB | lineage2.2.1 | None | SRR16295746 | Other | lineage2.2.1 | None | ERR3559281 | HR-TB | lineage4.2.2 | None | SRR16295808 | Other | lineage2.2.1 | None | SRR1184312 | Other | lineage2.2.1 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR15368973 | Other | lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | SRR16295811 | Other | lineage2.2.1 | None | ERR2027263 | Other | lineage4 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1173118 | Other | lineage2.2.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | SRR6789621 | Other | lineage4.9 | None | SRR10993944 | Other | La1.6 | None | SRR6785227 | Other | lineage2.2.1 | None | SRR1173384 | Other | lineage4.9 | None | SRR16295787 | Other | lineage2.2.1 | None | ERR6358728 | MDR-TB | lineage4.6.1.2 | None | SRR16295824 | Other | lineage2.2.1 | None | ERR3559283 | HR-TB | lineage4.2.2 | None | SRR3675248 | Other | lineage4.9 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR16295763 | Other | lineage2.2.1 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | ERR3559275 | HR-TB | lineage4.2.2 | None | SRR16295810 | Other | lineage2.2.1 | None | SRR1173153 | Other | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | SRR1172951 | Other | lineage4.9 | None | SRR1165699 | Other | lineage4.9 | None | SRR13423629 | MDR-TB | lineage2.2.1 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR16295816 | Other | lineage2.2.1 | None | SRR21690574 | Other | lineage4.1.2.1 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR11049020 | Other | lineage4.8 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR21737226 | Sensitive | lineage4.5 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR10869302 | MDR-TB | lineage4.3.2.1 | None | SRR1173484 | Sensitive | lineage4.9 | None | ERR1034911 | MDR-TB | lineage4.3.3;lineage4.3.4.2 | pt | SRR16295791 | Other | lineage2.2.1 | None | SRR1196546 | Other | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR16295793 | Other | lineage2.2.1 | None | SRR1172817 | Other | La3 | None | ERR3559282 | HR-TB | lineage4.2.2 | None | ERR11465024 | Other | lineage4.1.1.3 | None | SRR16295760 | Other | lineage2.2.1 | None | SRR3675311 | Other | lineage4.9 | None | SRR10482948 | Other | La1.8.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR16295737 | Other | lineage2.2.1 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786617 | Other | lineage4.1.1.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR1035300 | HR-TB | lineage4.1.2.1 | br | SRR16295775 | Other | lineage2.2.1 | None | SRR16295743 | Other | lineage2.2.1 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR1184381 | MDR-TB | None | SRR1184372 | MDR-TB | None | SRR6789626 | Other | None | SRR1172857 | Other | None | SRR7496517 | Other | None | ERR4407463 | HR-TB | None | SRR28119805 | Other | lineage4.9 | None | SRR1196768 | MDR-TB | None | SRR28119777 | Other | lineage4.9 | None | SRR16295809 | Other | lineage2.2.1 | None | SRR1196583 | Other | lineage4.9 | None | SRR16295825 | Other | lineage2.2.1 | None | SRR16295788 | Other | lineage2.2.1 | None | ERR2660545 | Sensitive | lineage4.3.2.1 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR502908 | HR-TB | lineage2.2.1 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR16295769 | Other | lineage2.2.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR16295738 | Other | lineage2.2.1 | None | SRR16295828 | Other | lineage2.2.1 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR18003019 | Other | lineage2.2.1 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR1173355 | Other | lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR12416829 | MDR-TB | lineage2.2.1 | None | SRR1169194 | Other | lineage4.9 | None | ERR3132168 | MDR-TB | lineage4.3.2 | None | ERR9786498 | Sensitive | lineage4.1.2.1 | None | SRR16295783 | Other | lineage2.2.1 | None | ERR3283044 | Other | lineage4 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR16295744 | Other | lineage2.2.1 | None | SRR16295771 | Other | lineage2.2.1 | None | ERR11138607 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR3559276 | HR-TB | lineage4.2.2 | None | SRR16295750 | Other | lineage2.2.1 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR1173706 | Other | lineage4.9 | None | SRR16295826 | Other | lineage2.2.1 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR2179850 | Sensitive | lineage4 | None | SRR16295801 | Other | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1173400 | Other | lineage4.9 | None | SRR16295780 | Other | lineage2.2.1 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR16295770 | Other | lineage2.2.1 | None | SRR16295777 | Other | lineage2.2.1 | None | SRR16295814 | Other | lineage2.2.1 | None | ERR1334032 | Other | lineage6.1.3 | None | SRR7496472 | Other | lineage4.9 | None | SRR16295819 | Other | lineage2.2.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR16295807 | Other | lineage2.2.1 | None | SRR1196474 | Other | lineage3.1.1 | None | SRR16295798 | Other | lineage2.2.1 | None | SRR16295766 | Other | lineage2.2.1 | None | ERR1213875 | Sensitive | lineage4.3.3 | de | ERR1213930 | Other | lineage4.3.2 | pe | SRR3675221 | Other | lineage4.9 | None | ERR2179695 | Sensitive | lineage4.5 | None | SRR16295806 | Other | lineage2.2.1 | None | SRR1184294 | Other | lineage4.9 | None | SRR6807688 | Pre-XDR-TB | lineage4.2.1 | None | SRR16295812 | Other | lineage2.2.1 | None | ERR9786421 | Other | lineage4.1.2.1 | None | SRR1196566 | Other | lineage4.9 | None | SRR16295818 | Other | lineage2.2.1 | None | SRR21732980 | Other | lineage4.3.3 | None | ERR4769546 | Other | La1.3 | None | SRR16295821 | Other | lineage2.2.1 | None | SRR16295829 | Other | lineage2.2.1 | None | SRR1172728 | RR-TB | La3 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR2307498 | HR-TB | lineage2.2.1 | None | SRR1172234 | Other | lineage4.9 | None | SRR6824572 | MDR-TB | lineage2.2.1 | None | ERR12015083 | Other | La3;lineage4.8 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR16295779 | Other | lineage2.2.1 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | SRR17406750 | Other | lineage1.1.2 | None | ERR2229542 | Other | lineage4.8 | None | ERR2600577 | Pre-XDR-TB | lineage2.2.1 | None | SRR28119741 | Pre-XDR-TB | lineage2.2.1 | None | ERR2600574 | MDR-TB | lineage2.2.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR4815752 | Other | lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR16295830 | Other | lineage2.2.1 | None |
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