EBG00000313339 - n.2557G>A


Drug resistance types
34 Sensitive 1 RR-TB 48 HR-TB 27 MDR-TB 13 Pre-XDR-TB 0 XDR-TB 145 Other
lineage Counts
lineage Count
La1.8.1 15
58
lineage4.9 20
lineage4.1.2.1 14
lineage4.1.3 2
lineage4.1.1 3
lineage4.3.4.1 3
La1.8 1
lineage3 3
La1.3 3
lineage4.8 4
La1 1
lineage2.2.1 79
lineage4.6.1.2 2
lineage4.6.1.1 1
lineage1.1.2 2
lineage6.3.1 2
La1.6 2
lineage4.3.2.1 3
lineage4.4.1.1 3
lineage4 7
lineage4.3.3 6
lineage3.1 2
lineage2 2
lineage1.2.2.2 2
lineage4.3.4.2 2
La1.4 1
lineage4.5 3
lineage2.1 2
lineage2.2 2
lineage4.1.3;lineage4.1.2.1;lineage1.1.2 1
lineage4.1.3;lineage1.1.2 1
lineage4;lineage1.1.2 1
lineage4.8;La3 1
lineage4.1.2 2
lineage4;lineage1.1 1
lineage4.7 1
lineage2.2.1.1 1
lineage4.2.1 1
lineage4.3.2 2
lineage4.9;lineage4.3.4.1 1
lineage4.4.2 1
lineage4.9;La1.8.1 1
lineage3;La3 1
lineage4.3.4.2;lineage4.3.3 1
lineage4.6.1.2;lineage4.3.3 1
spoligotype Counts
spoligotype Count
None 268
Geographic prevalence
Country level data for this variant is available for 16 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3797007 Other La1.8.1 None
ERR3797069 Other None
ERR3797071 Other lineage4.9 None
ERR4178216 Sensitive lineage4.1.2.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4024588 Other lineage4.1.1 None
ERR4178135 Sensitive lineage4.3.4.1 None
ERR4188160 Other La1.8.1 None
ERR4187916 Other La1.8.1 None
ERR4188021 Other La1.8.1 None
ERR4187819 Other La1.8 None
ERR4187993 Other La1.8.1 None
ERR4188273 Other La1.8.1 None
ERR4188213 HR-TB La1.8.1 None
ERR4188254 Other La1.8.1 None
ERR4188187 Other La1.8.1 None
ERR4407463 HR-TB None
ERR4188395 Other La1.8.1 None
ERR4407452 Sensitive lineage3 None
ERR4188381 Other La1.8.1 None
ERR4769428 Other La1.3 None
ERR4769412 Sensitive lineage4.9 None
ERR4810741 HR-TB None
ERR4769470 Sensitive lineage4.9 None
ERR4769546 Other La1.3 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR4769462 Other La1.3 None
ERR4769482 Sensitive La1 None
ERR4769537 Sensitive lineage4.9 None
ERR4769549 Sensitive lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4811022 HR-TB None
ERR6358728 MDR-TB lineage4.6.1.2 None
ERR4811105 HR-TB None
ERR4811142 MDR-TB None
ERR5336148 Other None
ERR6358755 Other lineage4.6.1.1 None
ERR9117709 HR-TB None
ERR736874 HR-TB None
ERR6359064 Sensitive lineage4.9 None
ERR6865691 Other lineage4.1.1 None
ERR6865773 Sensitive lineage4.1.2.1 None
ERR6865839 Sensitive lineage4.3.4.1 None
ERR736805 Sensitive lineage2.2.1 None
ERR736839 Other None
ERR9786421 Other lineage4.1.2.1 None
ERR9117721 HR-TB lineage1.1.2 None
ERR9786515 Other lineage4.1.2.1 None
ERR9786498 Sensitive lineage4.1.2.1 None
SRR10869292 Pre-XDR-TB lineage2.2.1 None
ERR9786694 Other lineage4.1.2.1 None
SRR10482948 Other La1.8.1 None
ERR9786617 Other lineage4.1.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786682 Other lineage4.1.2.1 None
ERR9787139 Other lineage6.3.1 None
SRR1172817 HR-TB None
SRR10993944 Other La1.6 None
SRR1172234 Other None
SRR10869302 MDR-TB lineage4.3.2.1 None
SRR10993957 Other La1.6 None
SRR1169194 Other None
SRR1172728 MDR-TB None
SRR1172844 MDR-TB lineage4.4.1.1 None
SRR1172857 MDR-TB None
SRR1173153 HR-TB None
SRR1173118 Other None
SRR1172951 Other None
SRR1173330 Pre-XDR-TB lineage4 None
SRR1173166 Other lineage4.9 None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173363 HR-TB None
SRR1173384 Other lineage4 None
SRR1173484 Other lineage4 None
SRR1173400 Other None
SRR1173562 HR-TB lineage4 None
SRR1173633 HR-TB lineage4.9 None
SRR1173788 Other None
SRR1173629 Other None
SRR1173706 Other lineage4.9 None
SRR1173778 Other None
SRR1175049 RR-TB None
SRR1184388 Other None
SRR1175090 Other lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184346 HR-TB lineage3.1 None
SRR1184372 MDR-TB None
SRR1184381 MDR-TB None
SRR1184380 HR-TB None
SRR1175074 MDR-TB None
SRR1184294 HR-TB None
SRR1184312 HR-TB lineage2.2.1 None
SRR1196474 HR-TB lineage3.1 None
SRR1196566 HR-TB None
SRR1196494 MDR-TB None
SRR1196546 HR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1196768 MDR-TB None
SRR1196677 HR-TB lineage2 None
SRR12416840 MDR-TB lineage4.9 None
SRR11972188 MDR-TB lineage2.2.1 None
SRR12199409 Other lineage1.2.2.2 None
SRR12142341 HR-TB None
SRR12416829 MDR-TB lineage2.2.1 None
SRR13837498 Sensitive lineage4.9 None
SRR12931719 Other lineage4.3.4.2 None
SRR13423629 MDR-TB lineage2.2.1 None
SRR16295743 Other lineage2.2.1 None
SRR16295735 Sensitive lineage2.2.1 None
SRR16295741 Other lineage2.2.1 None
SRR14782096 MDR-TB lineage2.2.1 None
SRR14782537 Pre-XDR-TB lineage2.2.1 None
SRR15368973 Other None
SRR16278273 Other La1.4 None
SRR16295737 Other lineage2.2.1 None
SRR16295746 Other lineage2.2.1 None
SRR16295744 Other lineage2.2.1 None
SRR16295760 Other lineage2.2.1 None
SRR16295750 Other lineage2.2.1 None
SRR16295752 Other lineage2.2.1 None
SRR16295766 Other lineage2.2.1 None
SRR16295763 Other lineage2.2.1 None
SRR16295770 Other lineage2.2.1 None
SRR16295771 Other lineage2.2.1 None
SRR16295738 Other lineage2.2.1 None
SRR16295772 Other lineage2.2.1 None
SRR16295769 Other lineage2.2.1 None
SRR16295739 Other lineage2.2.1 None
SRR16295775 Other lineage2.2.1 None
SRR16295779 Other lineage2.2.1 None
SRR16295777 Other lineage2.2.1 None
SRR16295790 Other lineage2.2.1 None
SRR16295782 Other lineage2.2.1 None
SRR16295732 Other lineage2.2.1 None
SRR16295783 Other lineage2.2.1 None
SRR16295792 Other lineage2.2.1 None
SRR16295789 Other lineage2.2.1 None
SRR16295788 Other lineage2.2.1 None
SRR16295791 Other lineage2.2.1 None
SRR16295780 Other lineage2.2.1 None
SRR16295787 Other lineage2.2.1 None
SRR16295801 Other lineage2.2.1 None
SRR16295793 Other lineage2.2.1 None
SRR16295798 Other lineage2.2.1 None
SRR16295808 Other lineage2.2.1 None
SRR16295809 Other lineage2.2.1 None
SRR16295781 Other lineage2.2.1 None
SRR16295807 Other lineage2.2.1 None
SRR16295806 Other lineage2.2.1 None
SRR16295811 Other lineage2.2.1 None
SRR16295816 Other lineage2.2.1 None
SRR16295817 Other lineage2.2.1 None
SRR16295819 Other lineage2.2.1 None
SRR16295810 Other lineage2.2.1 None
SRR16295826 Other lineage2.2.1 None
SRR16295812 Other lineage2.2.1 None
SRR16295813 Other lineage2.2.1 None
SRR16295814 Other lineage2.2.1 None
SRR16295829 Other lineage2.2.1 None
SRR16295830 Other lineage2.2.1 None
SRR16295820 Other lineage2.2.1 None
SRR16295821 Other lineage2.2.1 None
SRR16295825 Other lineage2.2.1 None
SRR16295818 Sensitive lineage2.2.1 None
SRR16295824 Other lineage2.2.1 None
SRR18213713 HR-TB lineage4.5 None
SRR16295828 Other lineage2.2.1 None
SRR1710057 Other lineage2.1 None
SRR17406750 Other lineage1.1.2 None
SRR18003019 Other lineage2.2.1 None
SRR18910194 HR-TB lineage2.2 None
SRR20969677 HR-TB lineage2 None
SRR19303884 HR-TB None
SRR19304036 HR-TB None
SRR21737226 Sensitive lineage4.5 None
ERR11068570 Other lineage4 None
SRR22175227 Pre-XDR-TB lineage3 None
ERR4814352 HR-TB lineage2.2.1 None
ERR11138607 Pre-XDR-TB lineage2.2.1 None
ERR4815604 HR-TB None
SRR3675465 HR-TB None
SRR3416776 Other lineage2.1 None
SRR3675221 HR-TB None
ERR4814683 Sensitive lineage4.1.3;lineage4.1.2.1;lineage1.1.2 None
ERR4815515 Sensitive lineage4.1.3;lineage1.1.2 None
SRR3675236 HR-TB None
SRR3675232 Other lineage4.1.2.1 None
SRR3675311 Other None
ERR2229542 Other lineage4.8 None
ERR4815752 Other lineage4.9 None
ERR4816928 HR-TB lineage1.2.2.2 None
ERR2124083 HR-TB lineage4.6.1.2 None
ERR4816999 Other None
ERR2027263 Other lineage4 None
SRR3675572 Other None
SRR3675574 HR-TB None
ERR4816585 Other lineage2.2 None
SRR3742665 HR-TB None
ERR2179850 Sensitive lineage4 None
ERR4818021 Other La1.8.1 None
ERR4817896 HR-TB lineage2.2.1 None
SRR7496472 Other None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR4817893 Other lineage4.8;La3 None
ERR2179695 Sensitive lineage4.5 None
ERR4820342 Sensitive lineage4.9 None
ERR4818279 Other lineage4.1.2 gb
ERR4819322 Other lineage4;lineage1.1 None
ERR4820854 Other lineage4.1.2.1 None
ERR2514692 Other None
ERR4819612 Other lineage4.1.2.1 gb
ERR4819781 Other lineage2.2.1 None
ERR4820826 Other lineage4.3.4.2 gb
ERR4819932 Other lineage4.7 None
SRR8380862 MDR-TB lineage2.2.1.1 in
ERR2660490 Sensitive lineage4.3.2.1 None
ERR4820922 Other lineage4.1.2.1 gb
SRR6045526 HR-TB None
ERR2660545 Sensitive lineage4.3.2.1 None
SRR6045817 Sensitive lineage4.8 gb
ERR2693227 Other lineage4.9 None
SRR6045849 Other lineage4.4.1.1 None
SRR6044964 Sensitive lineage3 None
SRR6044790 HR-TB None
SRR6044925 Sensitive lineage4.9 None
ERR4828226 Sensitive lineage2.2.1 vn
SRR6045327 HR-TB None
SRR6458423 HR-TB lineage2.2.1 None
SRR6046521 Other lineage4.4.1.1 None
ERR4972535 MDR-TB lineage4.1.2 None
SRR6484882 Pre-XDR-TB lineage2.2.1 None
SRR6785227 Other lineage2.2.1 None
SRR6785413 Other lineage2.2.1 None
SRR6785267 Other lineage2.2.1 None
SRR6785301 Sensitive lineage2.2.1 None
SRR6824572 MDR-TB lineage2.2.1 None
SRR6789626 Other None
SRR6807688 Pre-XDR-TB lineage4.2.1 None
SRR6982349 Sensitive lineage2.2.1 None
ERR3132168 MDR-TB lineage4.3.2 None
SRR6982053 Sensitive lineage4.9;lineage4.3.4.1 None
SRR6824603 Sensitive lineage4.4.2 None
ERR5311088 Other La1.8.1 None
ERR502908 HR-TB lineage2.2.1 None
ERR5311076 Other La1.8.1 None
ERR5311086 Sensitive lineage4.9;La1.8.1 None
SRR7131023 Other lineage4.1.2.1 None
SRR7131294 Other lineage6.3.1 None
SRR7496517 Other None
SRR7496509 Other None
SRR7535086 Other None
ERR1035300 HR-TB lineage4.1.2.1 br
ERR1023302 MDR-TB lineage3;La3 None
ERR1034907 Pre-XDR-TB lineage4.3.4.1 pt
ERR1034911 MDR-TB lineage4.3.4.2;lineage4.3.3 pt
ERR1035295 MDR-TB lineage4.1.2.1 br
ERR1213930 Other lineage4.3.2 pe
ERR11049020 Other lineage4.8 None
ERR1213875 Other lineage4.3.3 de
ERR1213931 MDR-TB lineage4.6.1.2;lineage4.3.3 pe
ERR1035312 Pre-XDR-TB lineage4.3.3 br
ERR3439285 Sensitive lineage4.9 None
ERR1213928 MDR-TB lineage4.3.3 pe
ERR3283027 HR-TB None
ERR3283043 Other lineage4.9 None
ERR3283036 HR-TB None
ERR3283046 MDR-TB lineage4.9 None
ERR3283051 Other lineage4.9 None