EBG00000313339 - n.2557G>A
Drug resistance types
34 Sensitive
1 RR-TB
48 HR-TB
27 MDR-TB
13 Pre-XDR-TB
0 XDR-TB
145 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 15 |
| 58 | |
| lineage4.9 | 20 |
| lineage4.1.2.1 | 14 |
| lineage4.1.3 | 2 |
| lineage4.1.1 | 3 |
| lineage4.3.4.1 | 3 |
| La1.8 | 1 |
| lineage3 | 3 |
| La1.3 | 3 |
| lineage4.8 | 4 |
| La1 | 1 |
| lineage2.2.1 | 79 |
| lineage4.6.1.2 | 2 |
| lineage4.6.1.1 | 1 |
| lineage1.1.2 | 2 |
| lineage6.3.1 | 2 |
| La1.6 | 2 |
| lineage4.3.2.1 | 3 |
| lineage4.4.1.1 | 3 |
| lineage4 | 7 |
| lineage4.3.3 | 6 |
| lineage3.1 | 2 |
| lineage2 | 2 |
| lineage1.2.2.2 | 2 |
| lineage4.3.4.2 | 2 |
| La1.4 | 1 |
| lineage4.5 | 3 |
| lineage2.1 | 2 |
| lineage2.2 | 2 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 1 |
| lineage4.1.3;lineage1.1.2 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.8;La3 | 1 |
| lineage4.1.2 | 2 |
| lineage4;lineage1.1 | 1 |
| lineage4.7 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.2 | 2 |
| lineage4.9;lineage4.3.4.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.9;La1.8.1 | 1 |
| lineage3;La3 | 1 |
| lineage4.3.4.2;lineage4.3.3 | 1 |
| lineage4.6.1.2;lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 268 |
Geographic prevalence
Country level data for this variant is available for 16 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3797007 | Other | La1.8.1 | None | ERR3797069 | Other | None | ERR3797071 | Other | lineage4.9 | None | ERR4178216 | Sensitive | lineage4.1.2.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4024588 | Other | lineage4.1.1 | None | ERR4178135 | Sensitive | lineage4.3.4.1 | None | ERR4188160 | Other | La1.8.1 | None | ERR4187916 | Other | La1.8.1 | None | ERR4188021 | Other | La1.8.1 | None | ERR4187819 | Other | La1.8 | None | ERR4187993 | Other | La1.8.1 | None | ERR4188273 | Other | La1.8.1 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4188254 | Other | La1.8.1 | None | ERR4188187 | Other | La1.8.1 | None | ERR4407463 | HR-TB | None | ERR4188395 | Other | La1.8.1 | None | ERR4407452 | Sensitive | lineage3 | None | ERR4188381 | Other | La1.8.1 | None | ERR4769428 | Other | La1.3 | None | ERR4769412 | Sensitive | lineage4.9 | None | ERR4810741 | HR-TB | None | ERR4769470 | Sensitive | lineage4.9 | None | ERR4769546 | Other | La1.3 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR4769462 | Other | La1.3 | None | ERR4769482 | Sensitive | La1 | None | ERR4769537 | Sensitive | lineage4.9 | None | ERR4769549 | Sensitive | lineage4.9 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4811022 | HR-TB | None | ERR6358728 | MDR-TB | lineage4.6.1.2 | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR5336148 | Other | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR9117709 | HR-TB | None | ERR736874 | HR-TB | None | ERR6359064 | Sensitive | lineage4.9 | None | ERR6865691 | Other | lineage4.1.1 | None | ERR6865773 | Sensitive | lineage4.1.2.1 | None | ERR6865839 | Sensitive | lineage4.3.4.1 | None | ERR736805 | Sensitive | lineage2.2.1 | None | ERR736839 | Other | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9786498 | Sensitive | lineage4.1.2.1 | None | SRR10869292 | Pre-XDR-TB | lineage2.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR10482948 | Other | La1.8.1 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR1172817 | HR-TB | None | SRR10993944 | Other | La1.6 | None | SRR1172234 | Other | None | SRR10869302 | MDR-TB | lineage4.3.2.1 | None | SRR10993957 | Other | La1.6 | None | SRR1169194 | Other | None | SRR1172728 | MDR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172857 | MDR-TB | None | SRR1173153 | HR-TB | None | SRR1173118 | Other | None | SRR1172951 | Other | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173166 | Other | lineage4.9 | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173484 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173788 | Other | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173778 | Other | None | SRR1175049 | RR-TB | None | SRR1184388 | Other | None | SRR1175090 | Other | lineage4.9 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184372 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1175074 | MDR-TB | None | SRR1184294 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196566 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196768 | MDR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR12199409 | Other | lineage1.2.2.2 | None | SRR12142341 | HR-TB | None | SRR12416829 | MDR-TB | lineage2.2.1 | None | SRR13837498 | Sensitive | lineage4.9 | None | SRR12931719 | Other | lineage4.3.4.2 | None | SRR13423629 | MDR-TB | lineage2.2.1 | None | SRR16295743 | Other | lineage2.2.1 | None | SRR16295735 | Sensitive | lineage2.2.1 | None | SRR16295741 | Other | lineage2.2.1 | None | SRR14782096 | MDR-TB | lineage2.2.1 | None | SRR14782537 | Pre-XDR-TB | lineage2.2.1 | None | SRR15368973 | Other | None | SRR16278273 | Other | La1.4 | None | SRR16295737 | Other | lineage2.2.1 | None | SRR16295746 | Other | lineage2.2.1 | None | SRR16295744 | Other | lineage2.2.1 | None | SRR16295760 | Other | lineage2.2.1 | None | SRR16295750 | Other | lineage2.2.1 | None | SRR16295752 | Other | lineage2.2.1 | None | SRR16295766 | Other | lineage2.2.1 | None | SRR16295763 | Other | lineage2.2.1 | None | SRR16295770 | Other | lineage2.2.1 | None | SRR16295771 | Other | lineage2.2.1 | None | SRR16295738 | Other | lineage2.2.1 | None | SRR16295772 | Other | lineage2.2.1 | None | SRR16295769 | Other | lineage2.2.1 | None | SRR16295739 | Other | lineage2.2.1 | None | SRR16295775 | Other | lineage2.2.1 | None | SRR16295779 | Other | lineage2.2.1 | None | SRR16295777 | Other | lineage2.2.1 | None | SRR16295790 | Other | lineage2.2.1 | None | SRR16295782 | Other | lineage2.2.1 | None | SRR16295732 | Other | lineage2.2.1 | None | SRR16295783 | Other | lineage2.2.1 | None | SRR16295792 | Other | lineage2.2.1 | None | SRR16295789 | Other | lineage2.2.1 | None | SRR16295788 | Other | lineage2.2.1 | None | SRR16295791 | Other | lineage2.2.1 | None | SRR16295780 | Other | lineage2.2.1 | None | SRR16295787 | Other | lineage2.2.1 | None | SRR16295801 | Other | lineage2.2.1 | None | SRR16295793 | Other | lineage2.2.1 | None | SRR16295798 | Other | lineage2.2.1 | None | SRR16295808 | Other | lineage2.2.1 | None | SRR16295809 | Other | lineage2.2.1 | None | SRR16295781 | Other | lineage2.2.1 | None | SRR16295807 | Other | lineage2.2.1 | None | SRR16295806 | Other | lineage2.2.1 | None | SRR16295811 | Other | lineage2.2.1 | None | SRR16295816 | Other | lineage2.2.1 | None | SRR16295817 | Other | lineage2.2.1 | None | SRR16295819 | Other | lineage2.2.1 | None | SRR16295810 | Other | lineage2.2.1 | None | SRR16295826 | Other | lineage2.2.1 | None | SRR16295812 | Other | lineage2.2.1 | None | SRR16295813 | Other | lineage2.2.1 | None | SRR16295814 | Other | lineage2.2.1 | None | SRR16295829 | Other | lineage2.2.1 | None | SRR16295830 | Other | lineage2.2.1 | None | SRR16295820 | Other | lineage2.2.1 | None | SRR16295821 | Other | lineage2.2.1 | None | SRR16295825 | Other | lineage2.2.1 | None | SRR16295818 | Sensitive | lineage2.2.1 | None | SRR16295824 | Other | lineage2.2.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR16295828 | Other | lineage2.2.1 | None | SRR1710057 | Other | lineage2.1 | None | SRR17406750 | Other | lineage1.1.2 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR20969677 | HR-TB | lineage2 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR21737226 | Sensitive | lineage4.5 | None | ERR11068570 | Other | lineage4 | None | SRR22175227 | Pre-XDR-TB | lineage3 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR11138607 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815604 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3416776 | Other | lineage2.1 | None | SRR3675221 | HR-TB | None | ERR4814683 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | ERR4815515 | Sensitive | lineage4.1.3;lineage1.1.2 | None | SRR3675236 | HR-TB | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675311 | Other | None | ERR2229542 | Other | lineage4.8 | None | ERR4815752 | Other | lineage4.9 | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | ERR4816999 | Other | None | ERR2027263 | Other | lineage4 | None | SRR3675572 | Other | None | SRR3675574 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | SRR3742665 | HR-TB | None | ERR2179850 | Sensitive | lineage4 | None | ERR4818021 | Other | La1.8.1 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR7496472 | Other | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR2179695 | Sensitive | lineage4.5 | None | ERR4820342 | Sensitive | lineage4.9 | None | ERR4818279 | Other | lineage4.1.2 | gb | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR2514692 | Other | None | ERR4819612 | Other | lineage4.1.2.1 | gb | ERR4819781 | Other | lineage2.2.1 | None | ERR4820826 | Other | lineage4.3.4.2 | gb | ERR4819932 | Other | lineage4.7 | None | SRR8380862 | MDR-TB | lineage2.2.1.1 | in | ERR2660490 | Sensitive | lineage4.3.2.1 | None | ERR4820922 | Other | lineage4.1.2.1 | gb | SRR6045526 | HR-TB | None | ERR2660545 | Sensitive | lineage4.3.2.1 | None | SRR6045817 | Sensitive | lineage4.8 | gb | ERR2693227 | Other | lineage4.9 | None | SRR6045849 | Other | lineage4.4.1.1 | None | SRR6044964 | Sensitive | lineage3 | None | SRR6044790 | HR-TB | None | SRR6044925 | Sensitive | lineage4.9 | None | ERR4828226 | Sensitive | lineage2.2.1 | vn | SRR6045327 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6046521 | Other | lineage4.4.1.1 | None | ERR4972535 | MDR-TB | lineage4.1.2 | None | SRR6484882 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785227 | Other | lineage2.2.1 | None | SRR6785413 | Other | lineage2.2.1 | None | SRR6785267 | Other | lineage2.2.1 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | SRR6824572 | MDR-TB | lineage2.2.1 | None | SRR6789626 | Other | None | SRR6807688 | Pre-XDR-TB | lineage4.2.1 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | ERR3132168 | MDR-TB | lineage4.3.2 | None | SRR6982053 | Sensitive | lineage4.9;lineage4.3.4.1 | None | SRR6824603 | Sensitive | lineage4.4.2 | None | ERR5311088 | Other | La1.8.1 | None | ERR502908 | HR-TB | lineage2.2.1 | None | ERR5311076 | Other | La1.8.1 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7131294 | Other | lineage6.3.1 | None | SRR7496517 | Other | None | SRR7496509 | Other | None | SRR7535086 | Other | None | ERR1035300 | HR-TB | lineage4.1.2.1 | br | ERR1023302 | MDR-TB | lineage3;La3 | None | ERR1034907 | Pre-XDR-TB | lineage4.3.4.1 | pt | ERR1034911 | MDR-TB | lineage4.3.4.2;lineage4.3.3 | pt | ERR1035295 | MDR-TB | lineage4.1.2.1 | br | ERR1213930 | Other | lineage4.3.2 | pe | ERR11049020 | Other | lineage4.8 | None | ERR1213875 | Other | lineage4.3.3 | de | ERR1213931 | MDR-TB | lineage4.6.1.2;lineage4.3.3 | pe | ERR1035312 | Pre-XDR-TB | lineage4.3.3 | br | ERR3439285 | Sensitive | lineage4.9 | None | ERR1213928 | MDR-TB | lineage4.3.3 | pe | ERR3283027 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None |
|---|
