Rv3596c - c.1080G>A
Drug resistance types
1 Sensitive
1 RR-TB
21 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
31 Other
lineage Counts
| lineage | Count |
|---|---|
| 23 | |
| lineage4.4.1.1 | 1 |
| lineage4.9 | 7 |
| lineage4.1.2.1 | 6 |
| lineage4.8 | 2 |
| lineage4.3.2 | 1 |
| lineage4.1.3 | 2 |
| lineage2.2.1 | 4 |
| lineage4.1.1 | 1 |
| lineage1.1.2 | 1 |
| lineage6 | 1 |
| lineage4.5 | 1 |
| lineage4 | 1 |
| lineage2.2 | 1 |
| La1.8.1 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage4.9;lineage3.1.2.1 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 56 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046540 | HR-TB | None | SRR6046521 | Other | lineage4.4.1.1 | None | ERR3283051 | Other | lineage4.9 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | SRR6789626 | Other | None | SRR7496509 | Other | None | ERR11049020 | Other | lineage4.8 | None | ERR3797069 | Other | None | ERR3797058 | Other | lineage4.9 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR387051 | HR-TB | None | ERR5336148 | Other | None | ERR9117709 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | ERR4815604 | HR-TB | None | ERR9787165 | Other | lineage6 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675221 | HR-TB | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675236 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675311 | Other | None | SRR3675555 | HR-TB | None | SRR3675456 | HR-TB | None | ERR4816999 | Other | None | ERR4815752 | Other | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR3675572 | Other | None | ERR4817060 | RR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR4818021 | Other | La1.8.1 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4817735 | Other | lineage4.8 | None | ERR4818615 | Other | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR2514390 | Sensitive | lineage4.9;lineage3.1.2.1 | None | ERR4819932 | Other | lineage4.7 | None | SRR6044855 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046066 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None |
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