Rv0668 - c.-19T>C


Drug resistance types
0 Sensitive 2 RR-TB 44 HR-TB 17 MDR-TB 1 Pre-XDR-TB 1 XDR-TB 56 Other
lineage Counts
lineage Count
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
M.canetti;lineage2.1;lineage4.9 3
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
M.canetti;lineage4.9 2
lineage4.9;lineage6.3 5
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2.1;lineage2.2;lineage6.3 1
lineage2.2.1.1 2
lineage4.9 14
M.canetti;lineage2.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
8
lineage2.1;lineage4.1.1.1;lineage6.3 1
lineage4.1.2.1 7
lineage2.1;lineage4.9 5
lineage2.1;lineage4.9;lineage6.3 6
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.8 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La3;lineage2.1;lineage4.9 3
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;lineage2.1;lineage4.9;lineage6.3 2
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 1
lineage2.2.2 1
lineage4 2
lineage4.1.3 2
M.canetti;lineage2.1;lineage6.3 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.9;lineage7 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage2.2 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.7.1 1
La3;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage2.2.1.2;lineage7 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage4.9;lineage9 1
lineage6.3.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.6.3;lineage4.9 1
lineage2.2.1;lineage3 1
M.canetti;lineage2.2.2;lineage6.2 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 2
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.6.2.2 1
M.canetti;lineage4.2 1
lineage2.2.1 4
lineage4.3.2;lineage4.9 1
lineage4.9;lineage6.1.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.9;lineage9 2
lineage2.2.1;lineage6.3 1
M.canetti;lineage1 1
La2;lineage4.9;lineage9 1
spoligotype Counts
spoligotype Count
None 121
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR1180147 Other lineage2.2.1.1 None
ERR6359082 Other lineage4.9 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR4811493 HR-TB lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR25827682 Other None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786421 Other lineage4.1.2.1 None
SRR1640750 Other None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3283042 Other lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR9786569 Other lineage4.8 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR18910194 HR-TB lineage2.2.2 None
ERR2027263 Other lineage4 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1165699 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR9786611 HR-TB lineage4.1.3 None
SRR7496509 Other None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR7496472 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR3804155 Other lineage4.1.2.1 None
SRR11662690 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR987722 MDR-TB None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
ERR9786604 Other None
SRR1167384 Other La3;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR9787139 Other lineage6.3.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR6045053 Other lineage4 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1165628 Other La3;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR5341330 Other lineage4.9 None
SRR6789626 Other None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4820854 Other lineage4.1.2.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR3797046 HR-TB lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR234659 Other None
SRR28119752 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
ERR4819422 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR9786682 Other lineage4.1.2.1 None
SRR20969708 HR-TB lineage2.2 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR323039 HR-TB La2;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1184312 Other lineage2.2.1 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR15014655 Other M.canetti;lineage1 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None