EBG00000313339 - n.756_766delACCCACACGCG
Drug resistance types
2 Sensitive
2 RR-TB
70 HR-TB
10 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
47 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.1 | 1 |
| lineage4.9 | 6 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.2;La1.7 | 1 |
| La1.2 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| 82 | |
| lineage4.1 | 1 |
| lineage4.1.1 | 2 |
| lineage2.2.1 | 3 |
| lineage4.3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1 | 1 |
| lineage4.6.4 | 2 |
| lineage2.2 | 2 |
| lineage3.1 | 1 |
| lineage4.1.2.1 | 5 |
| lineage4.8 | 6 |
| lineage4.1.3 | 2 |
| lineage4.6.2.2 | 3 |
| lineage3 | 2 |
| lineage2 | 2 |
| lineage4.8;La3 | 1 |
| lineage4.8;lineage4.1 | 1 |
| La3 | 1 |
| lineage6.3.1 | 1 |
| lineage4 | 1 |
| lineage1.2.1.2 | 1 |
| lineage2.2.1;La3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 136 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR26159043 | Other | lineage4.9 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR23961549 | Other | La1.2 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR161033 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675465 | HR-TB | None | SRR3675482 | HR-TB | None | SRR6325445 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR176643 | HR-TB | None | SRR3675221 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675486 | HR-TB | None | SRR3675572 | Other | None | SRR3675311 | Other | None | ERR212033 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR4816466 | HR-TB | None | SRR6325442 | HR-TB | None | ERR2229143 | Other | lineage4.1.1 | None | SRR5341302 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046225 | HR-TB | None | ERR4816656 | HR-TB | None | SRR7496472 | Other | None | ERR2693239 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR4872102 | MDR-TB | lineage4.6.4 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR294248 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6789626 | Other | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311081 | HR-TB | None | ERR5311099 | HR-TB | None | SRR7496517 | Other | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7496509 | Other | None | ERR5311090 | HR-TB | None | ERR323063 | HR-TB | None | ERR323038 | HR-TB | None | ERR323043 | HR-TB | None | ERR323055 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR11049020 | Other | lineage4.8 | None | ERR3283017 | HR-TB | None | ERR12015086 | Other | lineage4.8 | None | ERR12015084 | Other | lineage4.8 | None | ERR3797043 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3797016 | HR-TB | None | ERR3797069 | Other | None | ERR3797036 | HR-TB | None | ERR4407463 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR12015083 | Other | lineage4.8;La3 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR12015085 | Other | lineage4.8 | None | ERR4800341 | Other | lineage3 | None | ERR4811022 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811105 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6359045 | HR-TB | None | ERR736839 | Other | None | ERR702406 | HR-TB | None | ERR736874 | HR-TB | None | ERR736867 | HR-TB | None | ERR9119508 | MDR-TB | lineage4.6.4 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR8976043 | HR-TB | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786604 | Other | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR9786843 | Other | None | SRR1169249 | Other | La3 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9787197 | Other | None | SRR1167384 | Other | lineage4 | None | SRR25827682 | Other | None | SRR1173118 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173706 | Other | lineage4.9 | None | SRR1184388 | Other | None | SRR1196768 | MDR-TB | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR12142341 | HR-TB | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR19304036 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1172951 | Other | None | SRR1173363 | HR-TB | None | SRR1173400 | Other | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1184294 | HR-TB | None | SRR1184380 | HR-TB | None | SRR1196546 | HR-TB | None | SRR12416824 | HR-TB | None | SRR13861434 | RR-TB | lineage4.9 | None | SRR15368973 | Other | None | SRR1640750 | HR-TB | None | SRR19303884 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | ERR11081258 | Other | lineage4.8 | None | SRR26937071 | MDR-TB | lineage2.2.1;La3 | None |
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