lineage | Count |
---|---|
37 | |
lineage4.3.2 | 8 |
lineage2.2.1.1 | 2 |
lineage4.6.2.2 | 2 |
La2 | 1 |
lineage4.1.2 | 1 |
lineage4 | 3 |
lineage4.9 | 2 |
lineage1.2.2.2 | 1 |
lineage3 | 2 |
lineage3.1.2 | 1 |
lineage4.8;lineage4.1 | 2 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage2.2.1 | 6 |
lineage2.2 | 1 |
lineage1.2.1.2 | 1 |
lineage4.2.1 | 1 |
lineage4.9;lineage4.6.3 | 1 |
spoligotype | Count |
---|---|
None | 73 |
ID | Drug resistance | Lineage | Country iso2 | SRR5341470 | HR-TB | None | ERR551351 | Sensitive | lineage4.3.2 | de | ERR2693231 | Other | None | SRR5341330 | HR-TB | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR5535933 | HR-TB | None | SRR6045053 | Other | None | SRR6046397 | Other | None | ERR2693257 | Other | None | ERR294266 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR2184240 | Sensitive | lineage4.3.2 | pe | ERR1034652 | Other | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR067699 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR1063859 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797024 | Other | lineage4.9 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797014 | Other | None | ERR3797046 | HR-TB | None | ERR3797017 | Other | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR6866370 | Sensitive | lineage4.3.2 | None | ERR4812300 | Sensitive | lineage4.3.2 | None | ERR702404 | HR-TB | None | ERR736865 | HR-TB | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR7764341 | Sensitive | lineage4.3.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9657198 | Sensitive | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786843 | Other | None | ERR990545 | Other | lineage3 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1173788 | Other | None | SRR10808405 | Sensitive | lineage4.3.2 | None | SRR1172310 | HR-TB | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1174897 | HR-TB | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR12006713 | Sensitive | lineage1.2.1.2 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR3675234 | Other | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | ERR176740 | HR-TB | None | ERR1035183 | Sensitive | lineage4.3.2 | pt | SRR3675571 | HR-TB | None | ERR1193834 | Sensitive | lineage4.3.2 | de | SRR5341456 | Other | None | ERR234659 | HR-TB | None |
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