Rv0006 - c.1986G>C
Drug resistance types
2 Sensitive
1 RR-TB
22 HR-TB
10 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
12 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 2 |
| lineage4.9 | 15 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La1.7;lineage4.9 | 4 |
| lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage6.1.1 | 2 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| La1.7;lineage4.2 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| La2;lineage4.9 | 2 |
| lineage4.9;lineage9 | 2 |
| La2;lineage4.9;lineage9 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage2.2 | 1 |
| lineage4.3.4 | 1 |
| lineage3.1.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 48 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1180172 | Other | lineage2.2.1 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR26399265 | Other | lineage2.2.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | SRR29096410 | Other | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR29097026 | Other | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR1063855 | Other | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR29096150 | Other | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR8217918 | HR-TB | lineage4.9 | None |
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