Rv0006 - c.1986G>C
Drug resistance types
5 Sensitive
1 RR-TB
22 HR-TB
10 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 2 |
| lineage3.1.2 | 1 |
| lineage4.9 | 17 |
| La1.7;lineage4.9 | 4 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.3.4 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage6.1.1 | 2 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.2 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La2;lineage4.9 | 2 |
| lineage4.6 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage2.2.1.1 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 52 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR1180172 | Other | lineage2.2.1 | None |
| SRR22251398 | Sensitive | lineage3.1.2 | None |
| SRR29097026 | Other | lineage4.9 | None |
| ERR3283025 | MDR-TB | La1.7;lineage4.9 | None |
| SRR26159047 | Other | lineage4.6.3;lineage4.9 | None |
| SRR1180226 | HR-TB | lineage4.9 | None |
| SRR29096410 | Other | lineage4.9 | None |
| ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None |
| ERR736817 | HR-TB | lineage4.3.4 | None |
| ERR736837 | Pre-XDR-TB | lineage4.9 | None |
| SRR5341345 | Sensitive | lineage4.9 | None |
| ERR4798648 | MDR-TB | lineage3.1.2.2 | None |
| SRR5341470 | MDR-TB | lineage4.9;lineage9 | None |
| ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None |
| SRR29096659 | Sensitive | lineage4.9 | None |
| SRR8217918 | HR-TB | lineage4.9 | None |
| SRR29096150 | Other | lineage4.9 | None |
| ERR3799304 | Other | lineage6.1.1 | None |
| SRR1183111 | HR-TB | lineage4.9 | None |
| ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None |
| SRR23961559 | Other | La1.7;lineage4.2 | None |
| ERR176560 | HR-TB | La1.7;lineage4.9 | None |
| SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None |
| ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None |
| ERR4769444 | HR-TB | lineage4.9 | None |
| SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None |
| ERR4769439 | HR-TB | lineage4.9 | None |
| ERR4810624 | MDR-TB | lineage2.2 | None |
| ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None |
| ERR323039 | HR-TB | La2;lineage4.9 | None |
| ERR11049989 | Sensitive | lineage4.6 | None |
| SRR14801759 | HR-TB | La1.7;lineage4.9 | None |
| ERR4769474 | HR-TB | lineage4.9 | None |
| ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None |
| SRR26399265 | Other | lineage2.2.1 | None |
| SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None |
| SRR1183106 | RR-TB | lineage2.2.1.1 | None |
| SRR29097037 | Other | lineage4.9 | None |
| ERR4769442 | Sensitive | lineage4.9 | None |
| ERR212034 | HR-TB | La1.7;lineage4.9 | None |
| SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
| ERR502524 | HR-TB | lineage4.9;lineage6.3 | None |
| ERR3445504 | Other | lineage4.9;lineage6.1.3 | None |
| SRR1172310 | HR-TB | lineage4.9 | None |
| ERR9787014 | Other | lineage6.1.1 | None |
| SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
| ERR9119669 | HR-TB | lineage4.9 | None |
| SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
| ERR1063857 | MDR-TB | La2;lineage4.9 | None |
| SRR1174897 | MDR-TB | lineage4.9;lineage9 | None |
| ERR1063855 | Other | lineage4.9 | None |
| ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None |
