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SRA data
Rv0486
- c.504C>G
Drug resistance types
12 Sensitive
2 RR-TB
21 HR-TB
8 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
9 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
24
La1.7;lineage4.9;lineage7
3
lineage4.9;lineage9
2
lineage2.2.1
2
M.canetti;lineage4.9
2
La1.7;lineage4.9
2
lineage4.9;lineage7
2
lineage3.1.2.2
1
lineage3
1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
53
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR108125
RR-TB
lineage4.9
None
ERR323039
HR-TB
La2;lineage4.9
None
ERR323053
MDR-TB
La2;lineage4.9;lineage9
None
ERR3283025
MDR-TB
La1.7;lineage4.9
None
ERR3445501
HR-TB
La1.7.1;La1.7.X-unk4;lineage7
None
ERR3445502
Sensitive
lineage4.9;lineage7
None
ERR4769474
HR-TB
lineage4.9
None
ERR4798504
RR-TB
lineage3
None
ERR4798648
MDR-TB
lineage3.1.2.2
None
ERR4799478
Pre-XDR-TB
lineage2.2.1
None
Showing 1 to 10 of 53 entries
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