EBG00000313339 - n.1830C>T
Drug resistance types
9 Sensitive
2 RR-TB
21 HR-TB
4 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 3 |
| lineage2.2.1 | 7 |
| lineage4.2.1 | 1 |
| 12 | |
| lineage4.6.2.2 | 1 |
| lineage4.9 | 6 |
| lineage4.3.3 | 1 |
| lineage4.8 | 1 |
| lineage4 | 5 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage1.1.1 | 1 |
| lineage4.4.1.1 | 1 |
| La2 | 1 |
| lineage6.1.1 | 2 |
| lineage4.1.2.1 | 3 |
| lineage3.1.2 | 1 |
| lineage3 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| La1.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 53 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR14807646 | Pre-XDR-TB | lineage4.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR11972284 | MDR-TB | None | SRR1183106 | Other | lineage2.2.1.1 | None | ERR11082350 | MDR-TB | lineage4.6.2.2 | None | SRR19612355 | Sensitive | lineage2.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR20969400 | Sensitive | lineage2.2.1 | None | SRR2101455 | Sensitive | lineage4.3.3 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4814639 | HR-TB | lineage4 | None | ERR176740 | HR-TB | None | ERR4815815 | Sensitive | lineage4 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR3675571 | HR-TB | None | ERR4818536 | Other | lineage4.9 | None | ERR323053 | HR-TB | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4821938 | Sensitive | lineage4.4.1.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR294266 | HR-TB | None | ERR323039 | HR-TB | None | ERR4819462 | Other | lineage4 | None | SRR5341470 | HR-TB | None | SRR6046397 | Other | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502524 | HR-TB | La2 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR114488 | MDR-TB | lineage2.2.1 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798504 | Other | lineage3 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR5908131 | Sensitive | lineage4.1.1.2 | None | ERR736865 | HR-TB | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1172310 | HR-TB | None | ERR11050191 | HR-TB | lineage4.1.2.1 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | SRR1174897 | HR-TB | None |
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