lineage | Count |
---|---|
lineage6.1.3 | 2 |
lineage4.2;lineage4.8.1;lineage4.9 | 1 |
lineage4.2;lineage4.9 | 2 |
lineage4.3.2;lineage4.9 | 1 |
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
lineage4.1.2.1 | 1 |
lineage3 | 3 |
lineage2.2.1 | 4 |
lineage3.1.2.2 | 1 |
lineage4.9 | 6 |
lineage2.2.1.1 | 1 |
lineage4.6.3;lineage4.9 | 1 |
1 | |
lineage3.1.2.1;lineage3.1.2.2 | 1 |
lineage6.1.1 | 2 |
La2;lineage4.9;lineage9 | 1 |
lineage4.9;lineage6.3 | 1 |
lineage2.1;lineage4.9;lineage6.3 | 1 |
La2;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 32 |
ID | Drug resistance | Lineage | Country iso2 | ERR1023236 | Other | lineage6.1.3 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4798504 | RR-TB | lineage3 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR990545 | Other | lineage3 | None | ERR473332 | Other | lineage4.9 | None | ERR9787153 | Other | lineage6.1.3 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR987722 | MDR-TB | None | SRR29096410 | Other | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR29097026 | Other | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR26399265 | Other | lineage2.2.1 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR323039 | HR-TB | La2;lineage4.9 | None |
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