EBG00000313339 - n.2375C>T
Drug resistance types
13 Sensitive
4 RR-TB
16 HR-TB
10 MDR-TB
3 Pre-XDR-TB
1 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage6.1.1 | 2 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.2.1 | 2 |
| lineage3.1.2.1 | 2 |
| lineage4.9 | 13 |
| La2;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.3.4.1 | 2 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage2.2.1.1 | 3 |
| lineage2.2.1 | 2 |
| lineage2.2.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.8 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.6.1.2 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage4.4.2 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage4.2.1.1 | 1 |
| lineage1.1.2 | 1 |
| 1 | |
| lineage3 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 1 |
| La1.8.1 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage3.1.2.2 | 1 |
| La1.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.3.3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 63 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR11466444 | Sensitive | lineage4.3.4.1 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR11466445 | Sensitive | lineage4.3.4.1 | None | ERR1163055 | MDR-TB | lineage4.8 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | SRR5341373 | Other | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR5341400 | Sensitive | lineage4.9 | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | SRR5341293 | Sensitive | lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR27069465 | MDR-TB | lineage4.4.2 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR18715154 | Sensitive | lineage4.2.1.1 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR987722 | MDR-TB | None | SRR17832802 | HR-TB | lineage3 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR7236399 | Other | La1.8.1 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4798504 | RR-TB | lineage3 | None | ERR4769436 | Other | La1.3 | None | SRR7236330 | Other | La1.8.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR1034902 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR4818536 | Other | lineage4.9 | None | ERR12745260 | Sensitive | lineage4.3.3 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
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