lineage | Count |
---|---|
La2;lineage4.9;lineage9 | 1 |
lineage4.1.3 | 1 |
lineage3 | 2 |
2 | |
lineage4.9 | 10 |
lineage4.9;lineage6.3 | 2 |
La1.7;lineage4.9 | 2 |
La3;lineage2 | 1 |
lineage2.2.1 | 1 |
lineage2.2.1.2 | 1 |
lineage2.2.1;lineage3 | 1 |
lineage4.9;lineage9 | 1 |
lineage2.1;lineage4.9;lineage6.3 | 2 |
lineage4.3.2;lineage4.9 | 1 |
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
lineage4.6.1.1 | 1 |
La3;lineage4.9 | 1 |
La2;lineage4.9 | 1 |
La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
lineage2.2.1;lineage6.3 | 1 |
lineage3.1.2.2 | 1 |
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
lineage4.6.3;lineage4.9 | 1 |
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
lineage2.1 | 1 |
lineage4.2;lineage4.9 | 1 |
lineage6.3.1 | 1 |
spoligotype | Count |
---|---|
None | 42 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None |
ERR3804169 | HR-TB | lineage4.1.3 | None |
ERR4800341 | Other | lineage3 | None |
SRR25827682 | Other | None | |
SRR28119805 | Other | lineage4.9 | None |
SRR28119756 | Other | lineage4.9;lineage6.3 | None |
ERR212034 | HR-TB | La1.7;lineage4.9 | None |
SRR1180226 | HR-TB | lineage4.9 | None |
SRR29096410 | Other | lineage4.9 | None |
SRR1172310 | HR-TB | lineage4.9 | None |
SRR20969677 | HR-TB | La3;lineage2 | None |
SRR10040529 | MDR-TB | lineage2.2.1 | None |
ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None |
SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None |
SRR1174897 | MDR-TB | lineage4.9;lineage9 | None |
SRR26159043 | Other | lineage4.9 | None |
ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
SRR29097026 | Other | lineage4.9 | None |
SRR29097037 | Other | lineage4.9 | None |
ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None |
SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
ERR6358755 | Other | lineage4.6.1.1 | None |
SRR26399973 | Other | La3;lineage4.9 | None |
ERR323039 | HR-TB | La2;lineage4.9 | None |
ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None |
SRR28119811 | Other | lineage2.2.1;lineage6.3 | None |
ERR4798648 | MDR-TB | lineage3.1.2.2 | None |
ERR4798504 | RR-TB | lineage3 | None |
SRR28119752 | Other | lineage4.9 | None |
SRR1183111 | HR-TB | lineage4.9 | None |
SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
ERR176560 | HR-TB | La1.7;lineage4.9 | None |
ERR9786843 | Other | None | |
SRR26159047 | Other | lineage4.6.3;lineage4.9 | None |
ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None |
SRR12142341 | HR-TB | lineage2.1 | None |
ERR502524 | HR-TB | lineage4.9;lineage6.3 | None |
ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None |
ERR9787139 | Other | lineage6.3.1 | None |
ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None |
SRR28119753 | Other | lineage4.9 | None |