Rv0006 - c.-515G>A


Drug resistance types
4 Sensitive 1 RR-TB 29 HR-TB 13 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 19 Other
lineage Counts
lineage Count
La1.7;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.9;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La3;M.canetti;lineage2.2.1 1
La1.6;La3;M.canetti;lineage4.2.2 1
lineage4.9 21
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1;lineage2;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4 1
La3 2
La1.4 1
lineage2.2.1.1 1
lineage4.6.3;lineage4.9 1
lineage2.2.1 1
1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;lineage2.1;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.3.3 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La2;lineage4.9 1
lineage4.9;lineage9 3
M.canetti;lineage2.1;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
lineage2.2 2
lineage4.2;lineage4.9 1
lineage4.3.2;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage4.9 1
M.canetti;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
La2;lineage4.9;lineage9 1
lineage3 1
La1;lineage4.9 1
lineage4.2;lineage4.8.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 67
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR176560 HR-TB La1.7;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR6046210 Other lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
SRR29096150 Other lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR4816478 HR-TB lineage4 None
SRR1172728 RR-TB La3 None
SRR16278274 Other La1.4 None
SRR6079962 HR-TB lineage2.2.1.1 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
SRR1173118 Other lineage2.2.1 None
SRR1184372 MDR-TB None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR29097026 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR5153091 HR-TB lineage4.3.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR4815441 HR-TB lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR4816656 Other lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR6044835 Other lineage4.9 None
SRR3675312 Sensitive lineage4.9 None
ERR4818536 Other lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR1196677 Other lineage2.2 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR6044876 Sensitive lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR990545 Other lineage3 None
ERR4819877 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
SRR1172817 Other La3 None
SRR1183111 HR-TB lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None