Rv0668 - c.1998C>G


Drug resistance types
12 Sensitive 6 RR-TB 23 HR-TB 17 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 21 Other
lineage Counts
lineage Count
lineage4.9 34
lineage2.2.1.1 3
La1.7;lineage4.9 3
lineage4.2;lineage4.9 2
lineage4.3.2;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 2
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La2;lineage4.9 2
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La2;lineage4.9;lineage9 1
lineage2.2.1 3
lineage4.2;lineage4.8.1;lineage4.9 2
1
lineage4.9;lineage6.3 1
lineage2.2 1
lineage3.1.2.1;lineage3.1.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
lineage3 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La1.8.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.8 1
La2;lineage2.2 1
lineage4.9;lineage9 2
lineage4 1
spoligotype Counts
spoligotype Count
None 79
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1183111 HR-TB lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR926157 Sensitive lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR29096150 Other lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR926154 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR926164 Other lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR987722 MDR-TB None
ERR926156 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR926165 Sensitive lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR926155 Sensitive lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR4820773 HR-TB lineage4.9 None
ERR736848 Other lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4798504 RR-TB lineage3 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR926159 Sensitive lineage4.9 None
ERR3797073 Other La1.8.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR29097066 Sensitive lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR29096410 Other lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR29097026 Other lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR926162 Sensitive lineage4.9 None
ERR926160 Sensitive lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR926158 Sensitive lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR1063846 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR926163 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR1180172 Other lineage2.2.1 None