Rv1173 - c.648G>A
Drug resistance types
3 Sensitive
3 RR-TB
13 HR-TB
13 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 10 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage2.2 | 1 |
| La1.7.1 | 1 |
| La2;lineage4.9 | 1 |
| La1.7;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| lineage3 | 2 |
| M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage4.3.4.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage3.1.2.2 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.9;lineage9 | 3 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage4.6.1.1 | 1 |
| 1 | |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.2.1.1 | 1 |
| lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 49 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR1183111 | HR-TB | lineage4.9 | None |
| SRR29097037 | Other | lineage4.9 | None |
| SRR1180226 | HR-TB | lineage4.9 | None |
| ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None |
| ERR4820112 | Sensitive | lineage4.1.1.1 | None |
| ERR502524 | HR-TB | lineage4.9;lineage6.3 | None |
| ERR4810624 | MDR-TB | lineage2.2 | None |
| SRR1792478 | HR-TB | La1.7.1 | None |
| ERR323039 | HR-TB | La2;lineage4.9 | None |
| ERR1023525 | HR-TB | La1.7;lineage4.9 | None |
| ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None |
| ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
| ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
| SRR26159047 | Other | lineage4.6.3;lineage4.9 | None |
| SRR10808730 | Other | lineage4.9 | None |
| ERR4188322 | Other | lineage4.6.4;lineage4.9 | None |
| SRR17832802 | HR-TB | lineage3 | None |
| SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
| ERR363500 | Sensitive | lineage4.9 | None |
| SRR29096410 | Other | lineage4.9 | None |
| ERR1035282 | MDR-TB | lineage4.3.4.1 | br |
| ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None |
| ERR4798648 | MDR-TB | lineage3.1.2.2 | None |
| SRR15014655 | Other | M.canetti;lineage1 | None |
| SRR6046720 | HR-TB | lineage4.9;lineage9 | None |
| ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
| SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| ERR363447 | Other | lineage4.9 | None |
| SRR29097026 | Other | lineage4.9 | None |
| SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
| ERR987733 | Other | lineage4.6.1.1 | None |
| SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| ERR987722 | MDR-TB | None | |
| ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
| SRR1172310 | HR-TB | lineage4.9 | None |
| ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None |
| ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None |
| SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
| ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
| SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None |
| SRR6832178 | HR-TB | lineage4.2.1.1 | None |
| SRR1174897 | MDR-TB | lineage4.9;lineage9 | None |
| ERR4798504 | RR-TB | lineage3 | None |
| SRR5341470 | MDR-TB | lineage4.9;lineage9 | None |
| SRR29096150 | Other | lineage4.9 | None |
| SRR6832249 | Sensitive | lineage2.2.1 | None |
