lineage | Count |
---|---|
lineage4.9 | 37 |
lineage2.2.1 | 1 |
La1.6;lineage4 | 1 |
lineage4.9;lineage6.3 | 1 |
lineage4.9;lineage9 | 2 |
La2;lineage4.9;lineage9 | 1 |
lineage2.2 | 1 |
La1.2.BCG | 1 |
lineage4.6.3;lineage4.9 | 1 |
1 | |
lineage4.3.2;lineage4.9 | 1 |
lineage2.1;lineage4.9;lineage7 | 1 |
lineage4 | 4 |
La2;lineage4.9 | 1 |
lineage4.9;lineage7 | 1 |
lineage3.1.2.2 | 1 |
lineage3 | 1 |
lineage3.1.2.1;lineage3.1.2.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage2.2.1;lineage4 | 1 |
La1.2.BCG;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 61 |
ID | Drug resistance | Lineage | Country iso2 | ERR971389 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR29097037 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | SRR6046878 | Other | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR29096150 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR1915487 | Other | La1.2.BCG | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR987722 | MDR-TB | None | ERR926156 | Sensitive | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR29096410 | Other | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR4769450 | Other | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4798504 | RR-TB | lineage3 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR29097026 | Other | lineage4.9 | None | ERR176740 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | SRR1915481 | Other | La1.2.BCG;lineage4.9 | None |
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