lineage | Count |
---|---|
82 | |
lineage4.9 | 21 |
lineage4.1.2.1 | 7 |
lineage2.2.1 | 4 |
lineage4 | 3 |
lineage1.1 | 1 |
lineage3.1 | 2 |
La2 | 1 |
lineage4.3.4 | 1 |
La1.8.1 | 2 |
lineage6.1.1 | 2 |
lineage4.3.4.1 | 1 |
lineage1.2.2.2 | 1 |
lineage3 | 1 |
lineage3.1.2 | 1 |
lineage4.3.3 | 2 |
lineage4.3.2 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage4.4.1.1 | 1 |
lineage4.1 | 1 |
lineage1.2.1.2.1 | 1 |
lineage4.9;lineage4.6.3 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.1.1.3 | 1 |
lineage4;lineage1.1.2 | 1 |
lineage4.1.1 | 1 |
spoligotype | Count |
---|---|
None | 142 |
ID | Drug resistance | Lineage | Country iso2 | SRR6045399 | Other | None | SRR6325442 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046397 | Other | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6325448 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6046824 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | ERR3077978 | Other | lineage1.1 | None | ERR323036 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR294248 | HR-TB | None | ERR502889 | Other | None | ERR502524 | HR-TB | La2 | None | ERR323039 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323053 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323063 | HR-TB | None | ERR067681 | HR-TB | None | ERR10796631 | Other | lineage4.3.4 | None | ERR1034652 | Other | None | ERR3283017 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR133986 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283024 | Other | None | ERR3439432 | Other | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3797014 | Other | None | ERR3797016 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797044 | Other | None | ERR3797017 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797082 | Other | lineage4.9 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797061 | Other | None | ERR387051 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3797083 | HR-TB | None | ERR6326069 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4798504 | Other | lineage3 | None | ERR403298 | HR-TB | lineage4 | None | ERR4188350 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6358991 | HR-TB | None | ERR6358837 | HR-TB | None | ERR736837 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR736865 | HR-TB | None | ERR8976043 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR736835 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1172310 | HR-TB | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR1640750 | HR-TB | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR6325445 | HR-TB | None | ERR158583 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675502 | Other | None | ERR4815471 | Other | lineage4.9 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675234 | Other | None | SRR3675383 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675456 | HR-TB | None | ERR176740 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | SRR3675550 | Other | None | SRR3675545 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675555 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR212121 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR1035162 | Other | None | ERR234659 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR2446563 | Other | lineage2.2.1 | nl | ERR2229143 | Other | lineage4.1.1 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341418 | Other | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR278594 | HR-TB | None | SRR5341470 | HR-TB | None | ERR2693230 | Other | None | ERR2693231 | Other | None | ERR2693239 | HR-TB | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045519 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045952 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6045264 | Sensitive | lineage2.2.1 | None |
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