Rv0006 - c.1323G>T
Drug resistance types
26 Sensitive
8 RR-TB
340 HR-TB
19 MDR-TB
0 Pre-XDR-TB
3 XDR-TB
326 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.2.BCG | 629 |
| lineage4.9 | 44 |
| lineage6.1.3 | 1 |
| lineage4.1;lineage4.9 | 2 |
| La1.2.BCG;lineage4.9 | 5 |
| La2;lineage4.9;lineage9 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| La2;lineage4.9 | 2 |
| lineage3 | 2 |
| lineage4.9;lineage9 | 2 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage6.1.1 | 2 |
| lineage3;lineage4.9 | 1 |
| 2 | |
| La1.2.BCG;lineage4 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1 | 1 |
| La1.2;La1.8.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage2.2.1 | 2 |
| lineage5.1.4 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.9.1 | 1 |
| La1.2.BCG;La1.8.1;lineage4 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.2.BCG;La1.8.2 | 1 |
| La1.2.BCG;lineage1.1.1 | 1 |
| La2;lineage2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 722 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4818509 | RR-TB | La1.2.BCG | gb | ERR4816011 | Other | La1.2.BCG | gb | ERR13291264 | HR-TB | La1.2.BCG | None | SRR7221301 | HR-TB | La1.2.BCG | None | ERR4820780 | MDR-TB | La1.2.BCG | gb | SRR8648485 | Other | La1.2.BCG | None | ERR13260081 | XDR-TB | La1.2.BCG | None | SRR7069775 | HR-TB | La1.2.BCG | None | SRR7069799 | HR-TB | La1.2.BCG | None | SRR1915488 | Other | La1.2.BCG | None | SRR7086716 | HR-TB | La1.2.BCG | None | SRR7086717 | Other | La1.2.BCG | None | SRR29356726 | HR-TB | La1.2.BCG | None | SRR29055396 | HR-TB | La1.2.BCG | None | ERR13285663 | HR-TB | La1.2.BCG | None | ERR13291192 | HR-TB | La1.2.BCG | None | SRR16278275 | Other | La1.2.BCG | None | ERR4816682 | Other | La1.2.BCG | gb | ERR11044175 | Other | La1.2.BCG | None | SRR29906752 | Other | La1.2.BCG | None | SRR7070247 | HR-TB | La1.2.BCG | None | ERR4829455 | HR-TB | La1.2.BCG | it | SRR10997362 | MDR-TB | La1.2.BCG | None | SRR14781940 | Other | La1.2.BCG | None | SRR13180338 | HR-TB | La1.2.BCG | None | ERR11067543 | HR-TB | La1.2.BCG | None | SRR24799201 | Other | La1.2.BCG | None | SRR15676433 | HR-TB | La1.2.BCG | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR17592374 | HR-TB | La1.2.BCG | None | SRR18911455 | HR-TB | La1.2.BCG | None | SRR13180287 | Other | La1.2.BCG | None | SRR7221302 | HR-TB | La1.2.BCG | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR24222985 | Other | La1.2.BCG | None | ERR9787256 | Other | lineage6.1.3 | None | ERR4819826 | HR-TB | La1.2.BCG | None | SRR1915483 | HR-TB | La1.2.BCG | None | SRR17592368 | Other | La1.2.BCG | None | ERR4829644 | HR-TB | La1.2.BCG | it | SRR28170708 | Other | La1.2.BCG | None | SRR13399343 | Other | La1.2.BCG | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR28868363 | HR-TB | La1.2.BCG | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | SRR10997358 | RR-TB | La1.2.BCG | None | SRR13180285 | Other | La1.2.BCG | None | ERR9125888 | Other | La1.2.BCG | None | SRR27450158 | Other | La1.2.BCG | None | ERR560445 | HR-TB | La1.2.BCG | None | SRR27450606 | Other | La1.2.BCG | None | SRR1735567 | Other | La1.2.BCG | None | ERR766243 | HR-TB | La1.2.BCG | None | ERR766251 | Other | La1.2.BCG | None | SRR17592378 | Other | La1.2.BCG | None | SRR10303300 | Other | La1.2.BCG | None | SRR14782824 | Other | La1.2.BCG | None | ERR4821255 | Other | La1.2.BCG | None | ERR4816666 | Other | La1.2.BCG | gb | SRR16058141 | HR-TB | La1.2.BCG | None | SRR13180373 | HR-TB | La1.2.BCG | None | ERR766270 | Other | La1.2.BCG | None | ERR9899661 | Other | La1.2.BCG | None | SRR10997355 | HR-TB | La1.2.BCG | None | SRR1915481 | Other | La1.2.BCG;lineage4.9 | None | SRR8234774 | HR-TB | La1.2.BCG | None | SRR17592375 | HR-TB | La1.2.BCG | None | SRR29096150 | Other | lineage4.9 | None | ERR11068388 | Other | La1.2.BCG | None | SRR21689921 | HR-TB | La1.2.BCG | None | SRR9593171 | Other | La1.2.BCG | None | ERR766253 | Other | La1.2.BCG | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR4829633 | HR-TB | La1.2.BCG | it | ERR766220 | Other | La1.2.BCG | None | ERR560444 | Other | La1.2.BCG | None | ERR4821455 | Other | La1.2.BCG | gb | SRR27450601 | HR-TB | La1.2.BCG | None | SRR27450620 | HR-TB | La1.2.BCG | None | SRR14782003 | Other | La1.2.BCG | None | ERR4821464 | Other | La1.2.BCG | None | SRR5341453 | Other | lineage4.9 | None | ERR5102809 | HR-TB | La1.2.BCG | None | ERR766224 | Other | La1.2.BCG | None | SRR27450623 | Other | La1.2.BCG | None | ERR4815781 | HR-TB | La1.2.BCG | gb | ERR766238 | Other | La1.2.BCG | None | ERR9125853 | Other | La1.2.BCG | None | ERR766216 | HR-TB | La1.2.BCG | None | ERR766272 | Other | La1.2.BCG | None | ERR560440 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR27450616 | Other | La1.2.BCG | None | SRR28170722 | Other | La1.2.BCG | None | SRR21690370 | Other | La1.2.BCG | None | SRR8102332 | HR-TB | La1.2.BCG | None | SRR29356637 | HR-TB | La1.2.BCG | None | SRR28170714 | HR-TB | La1.2.BCG | None | ERR766263 | Other | La1.2.BCG | None | SRR28046304 | MDR-TB | La1.2.BCG | None | ERR766219 | Other | La1.2.BCG | None | SRR7069887 | Other | La1.2.BCG | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR9593175 | Other | La1.2.BCG | None | ERR11049655 | Other | La1.2.BCG | None | ERR4815533 | HR-TB | La1.2.BCG | gb | ERR560451 | HR-TB | La1.2.BCG | None | ERR766250 | Other | La1.2.BCG | None | ERR4829038 | Other | La1.2.BCG | it | ERR4829548 | HR-TB | La1.2.BCG | it | SRR1915485 | Other | La1.2.BCG | None | ERR736834 | Sensitive | lineage4.9 | None | SRR27450603 | HR-TB | La1.2.BCG | None | ERR11049622 | Other | La1.2.BCG | None | SRR8648478 | Other | La1.2.BCG | None | SRR9596061 | HR-TB | La1.2.BCG | None | ERR4816595 | Other | La1.2.BCG | gb | SRR14802224 | Other | La1.2.BCG | None | ERR4819762 | Other | La1.2.BCG | None | SRR9596056 | MDR-TB | La1.2.BCG | None | ERR13291503 | HR-TB | La1.2.BCG | None | SRR13180228 | HR-TB | La1.2.BCG | None | SRR7070062 | MDR-TB | La1.2.BCG | None | ERR019852 | HR-TB | La1.2.BCG | None | SRR27450608 | Other | La1.2.BCG | None | ERR400388 | HR-TB | La1.2.BCG | None | SRR29052895 | HR-TB | La1.2.BCG | None | ERR13285653 | HR-TB | La1.2.BCG | None | ERR4819451 | HR-TB | La1.2.BCG | None | SRR21690238 | Other | La1.2.BCG | None | ERR4821547 | Other | La1.2.BCG | None | ERR766258 | Other | La1.2.BCG | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR766260 | Other | La1.2.BCG | None | ERR4816052 | Other | La1.2.BCG | None | ERR13291408 | HR-TB | La1.2.BCG | None | SRR16100722 | HR-TB | La1.2.BCG | None | SRR28170826 | Other | La1.2.BCG | None | SRR28046224 | Other | La1.2.BCG | None | SRR28375406 | Other | La1.2.BCG | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | SRR28044796 | Other | La1.2.BCG | None | SRR9596066 | HR-TB | La1.2.BCG | None | SRR9593177 | Other | La1.2.BCG | None | SRR9596067 | HR-TB | La1.2.BCG | None | SRR28409560 | Other | La1.2.BCG | None | SRR29052793 | HR-TB | La1.2.BCG | None | SRR28409558 | Other | La1.2.BCG | None | ERR13292155 | HR-TB | La1.2.BCG | None | ERR4819270 | Other | La1.2.BCG | gb | ERR4820009 | Other | La1.2.BCG | gb | ERR2516307 | Other | La1.2.BCG | be | ERR2517166 | Other | La1.2.BCG | nl | SRR29441112 | Other | La1.2.BCG | None | SRR29440640 | Other | La1.2.BCG | None | SRR29440656 | Other | La1.2.BCG | None | SRR29440659 | Other | La1.2.BCG | None | SRR21690269 | HR-TB | La1.2.BCG | None | ERR349264 | Sensitive | lineage4.9 | None | ERR4818051 | HR-TB | La1.2.BCG | None | ERR4819139 | RR-TB | La1.2.BCG | None | ERR766213 | Other | La1.2.BCG | None | SRR17592387 | HR-TB | La1.2.BCG | None | SRR7069868 | HR-TB | La1.2.BCG | None | ERR4818908 | HR-TB | La1.2.BCG | None | SRR9596064 | HR-TB | La1.2.BCG | None | SRR27450609 | HR-TB | La1.2.BCG | None | SRR29053365 | HR-TB | La1.2.BCG | None | ERR766221 | HR-TB | La1.2.BCG | None | ERR766240 | HR-TB | La1.2.BCG | None | SRR29052828 | HR-TB | La1.2.BCG | None | SRR10321153 | RR-TB | La1.2.BCG | None | SRR8886989 | HR-TB | La1.2.BCG | None | SRR7496578 | Other | La1.2.BCG | None | ERR4797984 | Other | La1.2.BCG | in | SRR10997361 | MDR-TB | La1.2.BCG | None | DRR029468 | Other | La1.2.BCG | None | ERR9125787 | Other | La1.2.BCG | None | SRR6930897 | XDR-TB | La1.2.BCG | None | SRR21691049 | HR-TB | La1.2.BCG | None | SRR1915476 | HR-TB | La1.2.BCG | None | ERR2815610 | Other | La1.2.BCG | None | ERR4815226 | Other | La1.2.BCG | gb | SRR29055492 | HR-TB | La1.2.BCG | None | SRR16058482 | Other | La1.2.BCG | None | ERR11049026 | HR-TB | La1.2.BCG | None | SRR29053017 | HR-TB | La1.2.BCG | None | SRR16058167 | Other | La1.2.BCG | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR4821117 | Other | La1.2.BCG | None | SRR7983756 | Other | La1.2.BCG | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR7070098 | Other | La1.2.BCG | None | ERR766269 | Other | La1.2.BCG | None | ERR13265867 | Other | La1.2.BCG | None | ERR4820186 | HR-TB | La1.2.BCG | None | ERR2517495 | Other | La1.2.BCG | nl | SRR7069595 | Other | La1.2.BCG | None | SRR13180234 | HR-TB | La1.2.BCG | None | SRR13180278 | HR-TB | La1.2.BCG | None | ERR4363286 | HR-TB | La1.2.BCG | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR15676434 | Other | La1.2.BCG | None | ERR9125703 | HR-TB | La1.2.BCG | None | SRR6046018 | Other | La1.2.BCG | None | SRR27450275 | Other | La1.2.BCG | None | SRR7086713 | HR-TB | La1.2.BCG | None | SRR29096879 | Sensitive | lineage4.9 | None | ERR4814840 | HR-TB | La1.2.BCG | None | SRR9596060 | HR-TB | La1.2.BCG | None | SRR16089905 | HR-TB | La1.2.BCG | None | SRR29053554 | HR-TB | La1.2.BCG | None | ERR11068638 | HR-TB | La1.2.BCG | None | SRR29053501 | HR-TB | La1.2.BCG | None | SRR28170720 | HR-TB | La1.2.BCG | None | SRR28170786 | HR-TB | La1.2.BCG | None | SRR11662694 | Other | lineage4.9 | None | SRR13180304 | Other | La1.2.BCG | None | SRR6045637 | Other | La1.2.BCG | None | ERR766246 | Other | La1.2.BCG | None | ERR4821698 | Other | La1.2.BCG | None | SRR15676438 | Other | La1.2.BCG | None | SRR28170778 | Other | La1.2.BCG | None | ERR4798504 | RR-TB | lineage3 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR9596057 | Other | La1.2.BCG | None | ERR766236 | Other | La1.2.BCG | None | ERR766235 | Other | La1.2.BCG | None | SRR8886988 | Other | La1.2.BCG | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR560447 | HR-TB | La1.2.BCG;lineage4.9 | None | SRR7070115 | HR-TB | La1.2.BCG | None | SRR7086714 | HR-TB | La1.2.BCG | None | ERR766266 | Other | La1.2.BCG | None | ERR11049842 | Other | La1.2.BCG | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR4829543 | Other | La1.2.BCG | it | SRR28170799 | HR-TB | La1.2.BCG | None | ERR766264 | Other | La1.2.BCG | None | ERR766255 | Other | La1.2.BCG | None | SRR8648479 | Other | La1.2.BCG | None | SRR9593167 | Other | La1.2.BCG | None | SRR1166866 | Other | La1.2.BCG | None | SRR6046156 | HR-TB | La1.2.BCG | None | SRR29050624 | HR-TB | La1.2.BCG | None | SRR3675260 | Sensitive | lineage4.9 | None | SRR7086711 | HR-TB | La1.2.BCG | None | SRR9596063 | Other | La1.2.BCG | None | SRR7221299 | HR-TB | La1.2.BCG | None | SRR7070034 | Other | La1.2.BCG | None | SRR21690702 | HR-TB | La1.2.BCG | None | SRR28858666 | HR-TB | La1.2.BCG | None | SRR10997357 | HR-TB | La1.2.BCG | None | SRR9593168 | Other | La1.2.BCG | None | ERR766241 | Other | La1.2.BCG | None | ERR11044379 | HR-TB | La1.2.BCG | None | SRR7086712 | HR-TB | La1.2.BCG | None | SRR1735707 | HR-TB | La1.2.BCG | None | ERR757417 | HR-TB | La1.2.BCG | None | ERR766214 | HR-TB | La1.2.BCG | None | SRR27450273 | HR-TB | La1.2.BCG | None | SRR28409549 | HR-TB | La1.2.BCG | None | SRR28409351 | HR-TB | La1.2.BCG | None | SRR21689776 | HR-TB | La1.2.BCG | None | SRR21689974 | HR-TB | La1.2.BCG | None | SRR28859795 | HR-TB | La1.2.BCG | None | ERR9125581 | HR-TB | La1.2.BCG | None | SRR1915484 | Other | La1.2.BCG | None | ERR13291374 | HR-TB | La1.2.BCG | None | SRR28409495 | HR-TB | La1.2.BCG | None | SRR29341497 | HR-TB | La1.2.BCG | None | SRR7069083 | Other | La1.2.BCG | None | SRR1162747 | HR-TB | La1.2.BCG | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR21689504 | Other | La1.2.BCG | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR17592380 | HR-TB | La1.2.BCG | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR13292142 | HR-TB | La1.2.BCG | None | SRR8648484 | Other | La1.2.BCG | None | SRR15676439 | HR-TB | La1.2.BCG | None | SRR13180318 | Other | La1.2.BCG | None | ERR560450 | Other | La1.2.BCG | None | SRR27450197 | Other | La1.2.BCG | None | SRR27450605 | HR-TB | La1.2.BCG | None | SRR28858729 | HR-TB | La1.2.BCG | None | SRR21689777 | Other | La1.2.BCG | None | SRR28868899 | HR-TB | La1.2.BCG | None | SRR29050859 | Other | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR21689937 | Other | La1.2.BCG | None | SRR14782465 | Other | La1.2.BCG | None | SRR1167144 | HR-TB | La1.2.BCG | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR766254 | Other | La1.2.BCG | None | SRR10232122 | HR-TB | La1.2.BCG | None | SRR28858407 | HR-TB | La1.2.BCG | None | ERR11050420 | HR-TB | La1.2.BCG | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR14802226 | Other | La1.2.BCG | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR228166 | HR-TB | La1.2.BCG | None | SRR27450170 | HR-TB | La1.2.BCG | None | ERR4822030 | Other | La1.2.BCG | None | ERR766248 | Other | La1.2.BCG | None | SRR7069581 | Other | La1.2.BCG | None | ERR4195591 | HR-TB | La1.2.BCG | None | SRR9593172 | Other | La1.2.BCG | None | SRR13399334 | HR-TB | La1.2.BCG | None | SRR28170849 | Other | La1.2.BCG | None | SRR28046229 | Other | La1.2.BCG | None | ERR987722 | MDR-TB | None | SRR28409343 | Other | La1.2.BCG | None | SRR28045103 | Other | La1.2.BCG | None | ERR4820842 | Other | La1.2.BCG | gb | ERR4817421 | Other | La1.2.BCG | gb | ERR13285360 | Other | La1.2.BCG | None | ERR13285379 | Other | La1.2.BCG | None | ERR13291185 | Other | La1.2.BCG | None | ERR13291266 | Other | La1.2.BCG | None | ERR13291301 | Other | La1.2.BCG | None | ERR13291539 | Other | La1.2.BCG | None | ERR13291607 | Other | La1.2.BCG | None | SRR29440592 | Other | La1.2.BCG | None | ERR11049843 | HR-TB | La1.2.BCG | None | ERR766237 | HR-TB | La1.2.BCG | None | ERR4815180 | HR-TB | La1.2.BCG | gb | SRR10997354 | HR-TB | La1.2.BCG | None | SRR10997359 | Other | La1.2.BCG | None | ERR11049787 | HR-TB | La1.2.BCG | None | ERR2517304 | HR-TB | La1.2.BCG;lineage4 | nl | SRR1180226 | HR-TB | lineage4.9 | None | SRR7221304 | HR-TB | La1.2.BCG | None | SRR29055405 | HR-TB | La1.2.BCG | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR7070106 | MDR-TB | La1.2.BCG | None | ERR11044748 | HR-TB | La1.2.BCG | None | SRR1735643 | HR-TB | La1.2.BCG | gb | SRR17592384 | HR-TB | La1.2.BCG | None | SRR13399333 | HR-TB | La1.2.BCG | None | SRR8648475 | Other | La1.2.BCG | None | ERR11050679 | HR-TB | La1.2.BCG | None | SRR27450274 | Other | La1.2.BCG | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR017778 | HR-TB | La1.2.BCG | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR28170851 | HR-TB | La1.2.BCG | None | ERR4816465 | Other | La1.2.BCG | gb | ERR4817185 | HR-TB | La1.2.BCG | gb | ERR4819463 | HR-TB | La1.2.BCG | None | ERR4829650 | Other | La1.2.BCG | None | SRR28858615 | HR-TB | La1.2.BCG | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR766256 | HR-TB | La1.2.BCG | None | ERR766261 | HR-TB | La1.2.BCG | None | ERR13291673 | HR-TB | La1.2.BCG | None | ERR4816090 | HR-TB | La1.2.BCG | None | SRR10321147 | Other | La1.2.BCG | None | ERR387001 | Other | La1.2.BCG | None | SRR7086718 | HR-TB | La1.2.BCG | None | SRR8648477 | Other | La1.2.BCG | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR11050474 | HR-TB | La1.2.BCG | None | SRR7086715 | HR-TB | La1.2.BCG | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR11067503 | HR-TB | La1.2.BCG | None | ERR11068110 | HR-TB | La1.2.BCG | None | SRR5875882 | Other | La1.2.BCG | None | ERR766244 | HR-TB | La1.2.BCG | None | SRR27450228 | HR-TB | La1.2.BCG | None | ERR161048 | Other | La1.2.BCG | mw | SRR14782722 | Other | La1.2.BCG | None | ERR766230 | Other | La1.2.BCG | None | SRR28044340 | HR-TB | La1.2.BCG | None | SRR27450626 | Other | La1.2.BCG | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR7069803 | Other | La1.2.BCG | None | SRR27450356 | Other | La1.2.BCG | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR4363287 | Other | La1.2.BCG | None | SRR10321131 | Other | La1.2.BCG | None | SRR5485728 | Other | La1.2.BCG | None | SRR10232123 | Other | La1.2.BCG | None | SRR7070360 | HR-TB | La1.2.BCG | None | SRR7069945 | HR-TB | La1.2.BCG | None | SRR9593166 | Other | La1.2.BCG | None | SRR9596059 | HR-TB | La1.2.BCG | None | SRR27450619 | Other | La1.2.BCG | None | SRR1915477 | Other | La1.2.BCG | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR4816167 | Other | La1.2.BCG | gb | ERR766226 | Other | La1.2.BCG | None | ERR560448 | HR-TB | La1.2.BCG;lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR560446 | Other | La1.2.BCG | None | ERR4820361 | Other | La1.2.BCG | None | ERR11043503 | Other | La1.2.BCG | None | SRR10430327 | Other | La1.2.BCG | None | SRR1915478 | Other | La1.2.BCG | None | ERR4820855 | Other | La1.2.BCG | gb | SRR5341461 | HR-TB | lineage4.9 | None | SRR14807675 | Other | La1.2.BCG | None | ERR766257 | HR-TB | La1.2.BCG | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR1735661 | HR-TB | La1.2.BCG | gb | SRR16097556 | HR-TB | La1.2.BCG | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR1735703 | HR-TB | La1.2.BCG | gb | ERR400336 | Sensitive | lineage4.9 | None | SRR21690200 | HR-TB | La1.2.BCG | None | ERR4817646 | Other | La1.2.BCG | None | SRR29831039 | HR-TB | La1.2.BCG | None | SRR7069456 | HR-TB | La1.2.BCG | None | ERR766271 | Other | La1.2.BCG | None | ERR4831182 | Other | La1.2.BCG | de | ERR234151 | HR-TB | La1.2.BCG | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR13285675 | HR-TB | La1.2.BCG | None | ERR766265 | Other | La1.2.BCG | None | SRR18911229 | Other | La1.2.BCG | None | SRR28170738 | Other | La1.2.BCG | None | SRR16058264 | HR-TB | La1.2.BCG | None | SRR21690106 | Other | La1.2.BCG | None | SRR28868380 | Other | La1.2.BCG | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR10997356 | Other | La1.2.BCG | None | SRR3675387 | Other | lineage4.9 | None | SRR27450474 | Other | La1.2.BCG | None | SRR29053000 | HR-TB | La1.2.BCG | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR4821440 | HR-TB | La1.2.BCG | None | SRR10997360 | MDR-TB | La1.2.BCG | None | SRR21689894 | Other | La1.2.BCG | None | ERR551427 | HR-TB | La1.2.BCG | None | ERR4821748 | Other | La1.2.BCG | None | ERR9121663 | HR-TB | La1.2.BCG | None | ERR9286004 | Other | La1.2.BCG | None | SRR16089408 | HR-TB | La1.2.BCG | None | ERR2516191 | HR-TB | La1.2.BCG | be | SRR16089543 | Other | La1.2.BCG | None | SRR28026766 | Other | La1.2.BCG | None | SRR28170784 | HR-TB | La1.2.BCG | None | SRR9596069 | RR-TB | La1.2.BCG | None | SRR28868376 | HR-TB | La1.2.BCG | None | SRR7070076 | Other | La1.2.BCG | None | SRR13399331 | Other | La1.2.BCG | None | SAMN02414848 | HR-TB | La1.2.BCG | se | SRR7221303 | Other | La1.2.BCG | None | ERR4818422 | HR-TB | La1.2.BCG | gb | SRR1165461 | HR-TB | La1.2.BCG | None | SRR7983754 | HR-TB | La1.2.BCG | None | SRR8234778 | HR-TB | La1.2.BCG | None | SRR18897169 | Other | La1.2.BCG | None | ERR1034667 | Other | La1.2.BCG | bg | ERR2815602 | Other | La1.2.BCG | None | SRR29441130 | Other | La1.2.BCG | None | SRR7221300 | HR-TB | La1.2.BCG | None | ERR11067742 | HR-TB | La1.2.BCG | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR6046485 | Other | lineage4.9 | None | SRR27450370 | Other | La1.2.BCG | None | SRR1915487 | Other | La1.2.BCG | None | ERR2514832 | HR-TB | La1.2.BCG | None | SRR14782268 | Other | La1.2.BCG | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR4818704 | Other | La1.2.BCG | gb | SRR27450397 | Other | La1.2.BCG | None | SRR6046614 | Other | La1.2.BCG | None | SRR14782351 | HR-TB | La1.2.BCG | None | ERR2516215 | Other | La1.2.BCG | be | ERR13291579 | HR-TB | La1.2.BCG | None | ERR5102810 | Other | La1.2.BCG | None | SRR27450425 | HR-TB | La1.2.BCG | None | SRR7069368 | HR-TB | La1.2.BCG | None | ERR4820343 | Other | La1.2.BCG | gb | ERR4822011 | Other | La1.2.BCG | gb | ERR13291507 | Other | La1.2.BCG | None | SRR28409452 | HR-TB | La1.2.BCG | None | SRR29441036 | Other | La1.2.BCG | None | SRR29441058 | Other | La1.2.BCG | None | SRR21689499 | HR-TB | La1.2.BCG | None | SRR29440878 | Other | La1.2.BCG | None | ERR4818819 | HR-TB | La1.2.BCG | gb | SRR29440577 | Other | La1.2.BCG | None | ERR181824 | HR-TB | lineage4.9 | None | ERR212052 | HR-TB | La1.2.BCG | mw | SRR13399338 | HR-TB | La1.2.BCG | None | SRR9593169 | Other | La1.2.BCG | None | SRR24222959 | HR-TB | La1.2.BCG | None | SRR27450048 | HR-TB | La1.2.BCG | None | SRR29053082 | HR-TB | La1.2.BCG | None | ERR766249 | Other | La1.2.BCG | None | ERR766252 | Other | La1.2.BCG | None | ERR766268 | Other | La1.2.BCG | None | SRR17592379 | HR-TB | La1.2.BCG | None | SRR18897163 | HR-TB | La1.2.BCG | None | ERR11050992 | HR-TB | La1.2.BCG | None | SRR28170803 | HR-TB | La1.2.BCG | None | SRR29055741 | HR-TB | La1.2.BCG | None | SRR29055424 | HR-TB | La1.2.BCG | None | SRR21689783 | HR-TB | La1.2.BCG | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR15676436 | HR-TB | La1.2.BCG | None | SRR1735681 | HR-TB | La1.2.BCG | gb | SRR6045555 | Other | lineage4.9 | None | ERR11067586 | HR-TB | La1.2.BCG | None | SRR29056236 | HR-TB | La1.2.BCG | None | SRR28046223 | HR-TB | La1.2.BCG | None | SRR7070164 | HR-TB | La1.2.BCG | None | ERR11043674 | Other | La1.2.BCG | None | SRR28170837 | HR-TB | La1.2.BCG | None | SRR10321144 | Other | La1.2.BCG | None | ERR13285620 | HR-TB | La1.2.BCG | None | SRR29441132 | Other | La1.2.BCG | None | SRR27450628 | Other | La1.2.BCG | None | SRR27450272 | HR-TB | La1.2.BCG | None | ERR13285525 | HR-TB | La1.2.BCG | None | ERR766217 | HR-TB | La1.2.BCG | None | ERR766239 | HR-TB | La1.2.BCG | None | ERR4822113 | HR-TB | La1.2.BCG | None | ERR2512549 | HR-TB | La1.2.BCG | gb | ERR4819064 | HR-TB | La1.2.BCG | gb | SRR28409494 | HR-TB | La1.2.BCG | None | SRR15676437 | HR-TB | La1.2.BCG | None | SRR17592382 | HR-TB | La1.2.BCG | None | SRR7069801 | HR-TB | La1.2.BCG | None | SRR24827274 | HR-TB | La1.2.BCG | None | SRR28170801 | HR-TB | La1.2.BCG | None | SRR24222962 | HR-TB | La1.2.BCG | None | ERR11049990 | Other | La1.2.BCG | None | SRR27450621 | Other | La1.2.BCG | None | SRR24222984 | Other | La1.2.BCG | None | SRR10232121 | Other | La1.2.BCG | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR27450473 | Other | La1.2.BCG | None | ERR4814567 | Other | La1.2.BCG | None | SRR13180379 | Other | La1.2.BCG | None | SRR28351347 | Other | lineage3 | None | SRR24222960 | Other | La1.2.BCG | None | SRR9593174 | Other | La1.2.BCG | None | SRR27450472 | HR-TB | La1.2.BCG | None | SRR16058128 | HR-TB | La1.2.BCG | None | ERR766215 | Other | La1.2.BCG | None | SRR29053494 | HR-TB | La1.2.BCG | None | ERR766222 | Other | La1.2.BCG | None | ERR2516311 | Other | La1.2.BCG | be | SRR27450587 | HR-TB | La1.2.BCG | None | ERR4818639 | HR-TB | La1.2.BCG | None | SRR29289208 | XDR-TB | La1.2.BCG | None | SRR29440633 | HR-TB | La1.2.BCG | None | ERR766259 | Other | La1.2.BCG | None | ERR11067380 | Other | La1.2.BCG | None | SRR10379919 | HR-TB | La1.2.BCG | None | ERR13285681 | HR-TB | La1.2.BCG | None | ERR4829642 | HR-TB | La1.2.BCG | it | SRR29440554 | HR-TB | La1.2.BCG | None | ERR1063896 | Sensitive | None | SRR13014435 | Other | La1.2.BCG | None | SRR21690286 | HR-TB | La1.2.BCG | None | ERR766267 | Other | La1.2.BCG | None | SRR29053411 | HR-TB | La1.2.BCG | None | SRR27450271 | Other | La1.2.BCG | None | ERR13285408 | HR-TB | La1.2.BCG | None | SRR16058186 | Other | La1.2.BCG | None | ERR13291916 | HR-TB | La1.2.BCG | None | SRR27450379 | Other | La1.2.BCG | None | ERR766225 | Other | La1.2.BCG | None | ERR4820706 | HR-TB | La1.2.BCG | None | SRR10321135 | Other | La1.2.BCG | None | ERR757353 | Other | La1.2.BCG | None | ERR5102811 | Other | La1.2.BCG | None | SRR17592369 | HR-TB | La1.2.BCG | None | ERR766218 | HR-TB | La1.2.BCG | None | ERR766223 | HR-TB | La1.2.BCG | None | SRR28170804 | HR-TB | La1.2.BCG | None | SRR1915480 | HR-TB | La1.2.BCG | None | SRR9596058 | Other | La1.2.BCG | None | ERR766245 | Other | La1.2.BCG | None | ERR13292272 | HR-TB | La1.2.BCG | None | SRR13399337 | HR-TB | La1.2.BCG | None | ERR6358979 | Other | lineage4.9 | None | ERR1035141 | HR-TB | La1.2.BCG | sa | SRR8648486 | Other | La1.2.BCG | None | SRR9596062 | HR-TB | La1.2.BCG | None | SRR24222961 | HR-TB | La1.2.BCG | None | SRR13399341 | HR-TB | La1.2.BCG | None | ERR766262 | HR-TB | La1.2.BCG | None | ERR4822100 | Other | La1.2.BCG | None | ERR4820289 | Other | La1.2.BCG | gb | SRR13399339 | Other | La1.2.BCG | None | SRR29356616 | HR-TB | La1.2.BCG | None | ERR766228 | Other | La1.2.BCG | None | DRR305355 | Other | La1.2.BCG | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR9593173 | Other | La1.2.BCG | None | SRR1915489 | HR-TB | La1.2.BCG | None | ERR736872 | HR-TB | lineage4.9 | None | SRR8668953 | Other | La1.2.BCG | None | ERR4819733 | HR-TB | La1.2.BCG | gb | ERR4829499 | HR-TB | La1.2.BCG | None | SRR27450627 | HR-TB | La1.2.BCG | None | SRR3647355 | Other | La1.2.BCG | None | SRR13399336 | Other | La1.2.BCG | None | SRR21691079 | Other | La1.2.BCG | None | SRR7070400 | HR-TB | La1.2.BCG | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR28170698 | HR-TB | La1.2.BCG | None | SRR28859875 | HR-TB | La1.2.BCG | None | SRR29906791 | HR-TB | La1.2.BCG | None | SRR8648480 | Other | La1.2.BCG | None | SRR8648483 | Other | La1.2.BCG | None | ERR11067938 | HR-TB | La1.2.BCG | None | ERR4820965 | HR-TB | La1.2.BCG | gb | SRR24222963 | HR-TB | La1.2.BCG | None | SRR28409508 | HR-TB | La1.2.BCG | None | SRR16089681 | Other | La1.2.BCG | None | SRR1915479 | Other | La1.2.BCG | None | ERR4818297 | Other | La1.2.BCG | gb | SRR1735706 | HR-TB | La1.2.BCG | gb | SRR9596068 | HR-TB | La1.2.BCG | None | ERR9125558 | Other | La1.2.BCG | None | SRR1915486 | HR-TB | La1.2.BCG | None | ERR245758 | Other | lineage4.9.1 | None | ERR4820602 | Other | La1.2.BCG | gb | SRR14801882 | Other | La1.2.BCG | None | ERR13285516 | Other | La1.2.BCG | None | SRR13180255 | HR-TB | La1.2.BCG | None | SRR3647356 | Other | La1.2.BCG;La1.8.1;lineage4 | None | SRR13399332 | HR-TB | La1.2.BCG | None | SRR21690901 | Other | La1.2.BCG | None | SRR15676435 | Other | La1.2.BCG | None | ERR4814867 | HR-TB | La1.2.BCG | gb | SRR10232124 | Other | La1.2.BCG | None | SRR9593176 | Other | La1.2.BCG | None | SRR9596065 | HR-TB | La1.2.BCG | None | ERR13291881 | HR-TB | La1.2.BCG | None | SRR29441134 | HR-TB | La1.2.BCG | None | ERR4816055 | HR-TB | La1.2.BCG | None | ERR9811808 | HR-TB | La1.2.BCG | None | SRR13180348 | HR-TB | La1.2.BCG | None | SRR14781838 | HR-TB | La1.2.BCG | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR14782548 | Other | La1.2.BCG | None | SRR16089542 | HR-TB | La1.2.BCG | None | SRR7069678 | MDR-TB | La1.2.BCG | None | ERR4814591 | HR-TB | La1.2.BCG | None | SRR3675315 | HR-TB | La1.2.BCG | None | SRR28409394 | HR-TB | La1.2.BCG | None | SRR8648476 | Other | La1.2.BCG | None | SRR8648482 | Other | La1.2.BCG | None | SRR8692863 | Other | lineage2.2;lineage4 | None | ERR766247 | HR-TB | La1.2.BCG | None | ERR4822052 | Other | La1.2.BCG | None | SRR17592376 | HR-TB | La1.2.BCG | None | SRR17592377 | HR-TB | La1.2.BCG | None | DRR029469 | Other | La1.2.BCG | None | SRR13399330 | HR-TB | La1.2.BCG | None | SRR7069317 | HR-TB | La1.2.BCG | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR29356648 | HR-TB | La1.2.BCG | None | SRR27449962 | Other | La1.2.BCG | None | SRR27450618 | Other | La1.2.BCG | None | ERR11049331 | HR-TB | La1.2.BCG | None | ERR11067904 | HR-TB | La1.2.BCG | None | SRR29096410 | Other | lineage4.9 | None | SRR17592381 | HR-TB | La1.2.BCG | None | SRR17592385 | HR-TB | La1.2.BCG | None | ERR13291325 | HR-TB | La1.2.BCG | None | ERR13285341 | HR-TB | La1.2.BCG | None | ERR4817318 | HR-TB | La1.2.BCG | gb | SRR28868737 | HR-TB | La1.2.BCG | None | ERR560449 | HR-TB | La1.2.BCG;lineage4.9 | None | SRR29604864 | HR-TB | La1.2.BCG | None | SRR17592386 | HR-TB | La1.2.BCG | None | SRR7068937 | HR-TB | La1.2.BCG | None | ERR2516376 | Other | La1.2.BCG | be | SRR13180347 | Other | La1.2.BCG | None | SRR27450471 | HR-TB | La1.2.BCG | None | SRR27450475 | HR-TB | La1.2.BCG | None | ERR369162 | Other | lineage4.9 | None | SRR9593170 | Other | La1.2.BCG | None | SRR6045990 | HR-TB | La1.2.BCG | None | SRR29097026 | Other | lineage4.9 | None | SRR1915482 | HR-TB | La1.2.BCG | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR13180244 | HR-TB | La1.2.BCG | None | SRR13767788 | HR-TB | La1.2.BCG | None | SRR13986557 | HR-TB | La1.2.BCG;La1.8.2 | None | SRR9596070 | Other | La1.2.BCG | None | ERR4822040 | Other | La1.2.BCG | None | SRR27449966 | Other | La1.2.BCG | None | ERR766234 | Other | La1.2.BCG | None | SRR7070364 | HR-TB | La1.2.BCG | None | ERR4816886 | Other | La1.2.BCG | None | SRR14782713 | Other | La1.2.BCG | None | ERR766229 | Other | La1.2.BCG | None | SRR27450250 | Other | La1.2.BCG | None | SRR21878053 | Other | La1.2.BCG | None | SRR7070225 | Other | La1.2.BCG | None | SRR18912543 | HR-TB | La1.2.BCG | None | ERR766242 | Other | La1.2.BCG | None | ERR4820278 | Other | La1.2.BCG | None | SRR21689653 | Other | La1.2.BCG;lineage1.1.1 | None | ERR369158 | Other | lineage4.9 | None | SRR1915490 | Other | La1.2.BCG | None | ERR2517179 | HR-TB | La1.2.BCG | nl | ERR4817396 | RR-TB | La1.2.BCG | None | SRR29053016 | HR-TB | La1.2.BCG | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR3675257 | Other | La1.2.BCG | gb | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR13291941 | HR-TB | La1.2.BCG | None | SRR14782719 | HR-TB | La1.2.BCG | None | SRR8648481 | Other | La1.2.BCG | None |
|---|
