EBG00000313339 - n.2448_2449delGAinsT


Drug resistance types
1 Sensitive 25 RR-TB 36 HR-TB 82 MDR-TB 3 Pre-XDR-TB 2 XDR-TB 96 Other
lineage Counts
lineage Count
lineage4.9 46
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage2.1 2
lineage4.6.3;lineage4.9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.9 19
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage3.1.2.1;lineage3.1.2.2 1
La3;M.canetti;lineage2.1;lineage4.9 11
lineage4.1.2.1 16
La3;lineage4.9 4
lineage2.1;lineage4.9;lineage6.3 7
lineage3.1.2.2 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.6.2.2 3
M.canetti;lineage2.1;lineage4.1.2.1 1
La2;lineage4.9 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.1.3 2
La3;lineage4.8 1
lineage4.3.3 4
lineage2.1;lineage4.9 13
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage2.2.1 8
18
lineage4.9;lineage6.3 7
La3;M.canetti;lineage4.9 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.2 3
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage4.9 2
lineage6.3.1 1
lineage2.2 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.3.2 1
lineage3 1
lineage4.6.1.1 1
La1.8.1 2
lineage4 2
M.canetti;lineage2.2.2;lineage6.2 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage3.1 1
lineage4.9;lineage9 2
lineage3.1.1 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.8;lineage4.9 1
La3;lineage2 1
lineage1.2.1.2.1 1
La1.7.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.1.1.1 2
lineage2.2.2 1
lineage4.8 1
lineage2.2.1.1 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.6.4 2
M.canetti;lineage4.9 1
lineage2.2.1;lineage6.3 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.3.2;lineage4.9 1
La2;lineage4.9;lineage9 1
lineage4.5 1
lineage4.1.2.1.1 1
La3 2
lineage4.4.1.1 1
lineage2.1;lineage4.3.2 1
M.canetti;lineage2.1 1
lineage1.1 1
La3;M.canetti;lineage3.1 1
lineage2.1;lineage2.2;lineage6.3 1
lineage4.3.4.2.1 1
La3;M.canetti;lineage2.2.1 1
spoligotype Counts
spoligotype Count
None 245
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4820773 HR-TB lineage4.9 None
SRR3675482 RR-TB lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR702406 Other lineage2.1 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1180226 HR-TB lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR15368973 Other lineage4.9 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR1173778 Other lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR1169306 Other La3;lineage4.9 None
SRR1173706 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6789621 Other lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR3675248 Other lineage4.9 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1173562 Sensitive lineage4.9 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR9786421 Other lineage4.1.2.1 None
SRR3675448 Other lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR12015083 Other La3;lineage4.8 None
SRR1165628 Other La3;lineage4.9 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR5908228 RR-TB lineage4.3.3 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3275196 RR-TB lineage2.2.1 nl
ERR9786645 Other lineage4.6.2.2 None
SRR1165584 Other lineage4.1.2.1 None
SRR1175074 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9786604 Other None
ERR9786843 Other None
SRR1640750 RR-TB None
SRR6789626 Other None
SRR7535086 Other None
ERR987722 MDR-TB None
ERR212001 HR-TB None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR1167055 Other lineage4.1.2.1 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR18003019 Other lineage2.2.1 None
SRR1173355 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4817896 HR-TB lineage2.2.1 None
SRR1169194 Other lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3132168 MDR-TB lineage4.3.2 None
ERR2693228 RR-TB lineage4.9 None
SRR1173218 Other lineage4.3.3 None
ERR990545 RR-TB lineage3 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR1184312 Other lineage2.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
ERR3797023 MDR-TB La1.8.1 None
ERR2027263 Other lineage4 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1184346 HR-TB lineage3.1 None
SRR1173400 Other lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7496472 Other lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1196474 Other lineage3.1.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1165699 Other lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR176751 HR-TB lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR1175049 Other lineage4.8;lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR1162864 MDR-TB lineage4.1.2.1 None
SRR20969677 HR-TB La3;lineage2 None
SRR1196546 Other lineage4.9 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
ERR9786601 Other lineage4.1.2.1 None
SRR3675311 Other lineage4.9 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
SRR6046485 Other lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675572 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
SRR7496517 Other None
SRR1196583 Other lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR1165506 Other lineage4.1.2.1 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR1162740 Other lineage4.1.2.1 None
ERR9786569 Other lineage4.8 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR15600376 HR-TB lineage2.2.1.1 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR1791696 RR-TB La1.8.1 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR4872102 MDR-TB lineage4.6.4 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR867545 Other lineage4.9 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR6045219 HR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR176793 Other lineage4.1.1.1 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR1172951 Other lineage4.9 None
ERR867544 Other lineage4.9 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1196566 Other lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR13423544 Other lineage4.5 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
SRR1172728 RR-TB La3 None
ERR8665994 RR-TB lineage4.9 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
SRR1180137 RR-TB lineage2.2.1 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SAMN02414850 Other lineage4.1.2.1 None
ERR3468607 RR-TB lineage4.9 None
ERR4815752 Other lineage4.9 None
SRR1172817 Other La3 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR7131023 Other lineage4.1.2.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7496509 Other None
ERR9786671 Other None
SRR1173363 Other None
SRR1184372 MDR-TB None
SRR1172857 Other None
ERR4407463 HR-TB None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR9119508 MDR-TB lineage4.6.4 None
SRR3675507 RR-TB lineage4.9 None
ERR9786515 Other lineage4.1.2.1 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR3675549 Other lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR13423649 Other lineage2.2.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797083 RR-TB lineage4.9 None
SRR26159048 HR-TB lineage4.9 None