Rv0529 - c.822G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
14 Sensitive
3 RR-TB
32 HR-TB
8 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 33 |
| La3;lineage4.9 | 5 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage4.3.4.1 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage4.9;lineage7 | 3 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| lineage3.1.2.2 | 1 |
| 2 | |
| M.canetti;lineage1 | 1 |
| lineage4.9;lineage6.3 | 2 |
| La2;lineage4.9;lineage9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.6;lineage4 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.9;lineage9 | 2 |
| La1.7;lineage4.9 | 2 |
| lineage3 | 2 |
| lineage2.2.1 | 2 |
| lineage3.1.2.1 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| La2;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 82 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR3675280 | RR-TB | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR29096150 | Other | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR176740 | Other | lineage4.9 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | SRR29097037 | Other | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR29096410 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR29055611 | Sensitive | lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR29096425 | Sensitive | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR6358991 | HR-TB | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR4816656 | Other | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR11082350 | MDR-TB | lineage4.6.2.2 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR13278785 | MDR-TB | lineage4.6.2.2 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675582 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR29097026 | Other | lineage4.9 | None | SRR29096246 | Sensitive | La1.7;lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR987722 | MDR-TB | None | ERR181824 | HR-TB | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR29097004 | Other | lineage3 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR5341330 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR3797085 | Other | lineage4.9 | None |
|---|
