lineage | Count |
---|---|
lineage2.1;lineage4.9;lineage7 | 1 |
lineage2.2.1 | 3 |
lineage3 | 2 |
lineage4.2;lineage4.9 | 1 |
lineage3.1.2.1;lineage3.1.2.2 | 1 |
La1.8.1 | 1 |
lineage4.9;lineage9 | 2 |
lineage4.9 | 12 |
lineage4.8 | 1 |
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
M.canetti;lineage4.2;lineage4.9 | 1 |
lineage4.9;lineage7 | 2 |
lineage4.3.2.1 | 1 |
La2;lineage4.9;lineage9 | 1 |
lineage4.6.3;lineage4.9 | 1 |
lineage4.8;lineage4.9 | 2 |
lineage4.3.2;lineage4.9 | 1 |
lineage4.9;lineage6.3 | 1 |
lineage6.1.1 | 2 |
lineage4.1.2 | 1 |
La2;lineage4.9 | 1 |
lineage2.1;lineage4.9 | 1 |
lineage3.1.2.2 | 1 |
1 |
spoligotype | Count |
---|---|
None | 42 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None |
SRR6046382 | Sensitive | lineage2.2.1 | None |
SRR17832802 | HR-TB | lineage3 | None |
ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None |
ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None |
SRR1791747 | Other | La1.8.1 | None |
ERR4798504 | RR-TB | lineage3 | None |
SRR5341470 | MDR-TB | lineage4.9;lineage9 | None |
SRR10315567 | HR-TB | lineage2.2.1 | None |
SRR6511621 | Sensitive | lineage4.9 | None |
SRR9970979 | Sensitive | lineage4.8 | None |
SRR29097026 | Other | lineage4.9 | None |
SRR1180226 | HR-TB | lineage4.9 | None |
ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None |
SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None |
SRR1172310 | HR-TB | lineage4.9 | None |
ERR387051 | Other | lineage4.9 | None |
SRR3675231 | MDR-TB | lineage4.9;lineage7 | None |
SRR9970981 | RR-TB | lineage4.3.2.1 | None |
ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None |
ERR6866639 | Other | lineage4.9 | None |
SRR29096150 | Other | lineage4.9 | None |
ERR7821163 | Other | lineage2.2.1 | None |
SRR29097037 | Other | lineage4.9 | None |
SRR26159047 | Other | lineage4.6.3;lineage4.9 | None |
SRR3675539 | HR-TB | lineage4.9;lineage7 | None |
ERR6866022 | Other | lineage4.8;lineage4.9 | None |
ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None |
ERR502524 | HR-TB | lineage4.9;lineage6.3 | None |
SRR29096410 | Other | lineage4.9 | None |
ERR9787014 | Other | lineage6.1.1 | None |
SRR9970980 | HR-TB | lineage4.1.2 | None |
ERR323039 | HR-TB | La2;lineage4.9 | None |
SRR3675495 | Other | lineage2.1;lineage4.9 | None |
SRR1174897 | MDR-TB | lineage4.9;lineage9 | None |
ERR4798648 | MDR-TB | lineage3.1.2.2 | None |
ERR1035122 | Sensitive | lineage4.9 | None |
ERR3799304 | Other | lineage6.1.1 | None |
SRR1183111 | HR-TB | lineage4.9 | None |
ERR323085 | Sensitive | lineage4.9 | None |
ERR4024991 | Other | lineage4.8;lineage4.9 | None |
ERR987722 | MDR-TB | None |