Rv0668 - c.849C>T
Drug resistance types
8 Sensitive
3 RR-TB
20 HR-TB
14 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 3 |
| lineage3.1.2.2 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.9 | 16 |
| lineage4 | 1 |
| lineage5.2 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.9;lineage6.3 | 2 |
| 1 | |
| lineage4.2;lineage4.9 | 3 |
| lineage3 | 2 |
| La3;lineage4.9 | 1 |
| lineage4.6.2.2 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage6.1.1 | 2 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage2.2.1 | 3 |
| lineage4.1.2.1 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.9.1 | 1 |
| La2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 60 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | DRR188544 | Sensitive | lineage4.3.3 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR987722 | MDR-TB | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR11082350 | MDR-TB | lineage4.6.2.2 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR29096150 | Other | lineage4.9 | None | SRR29097026 | Other | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR3675312 | Sensitive | lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR4829606 | Sensitive | lineage4.1.2.1 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR13267255 | Sensitive | lineage4.3.3 | None | SRR28119726 | Other | lineage2.2.1 | None | ERR4798504 | RR-TB | lineage3 | None | DRR261078 | Sensitive | lineage4.3.3 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR29097037 | Other | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR29096410 | Other | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR11466530 | Sensitive | lineage4.1.1.3 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR245758 | Other | lineage4.9.1 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR13278785 | MDR-TB | lineage4.6.2.2 | None |
|---|
