Rv0006 - c.1393C>T


Drug resistance types
72 Sensitive 9 RR-TB 4 HR-TB 30 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 19 Other
lineage Counts
lineage Count
lineage4.1 69
lineage4.1.1 7
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage1.1.2;lineage3 1
1
lineage3 16
lineage4.1.2.1 2
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage6.1.1 2
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage4.2;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.6.3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage4.9 3
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.9;lineage9 2
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage4.2 1
M.canetti;lineage4.6.4;lineage4.9 2
M.canetti;lineage2.1;lineage4.9 1
lineage4.9;lineage6.3 2
lineage4.1;lineage4.3.4.2.1 1
lineage4.3.2;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage1.1.1.1;lineage4.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.5 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage3.1.2.2 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La2;lineage4.9;lineage9 1
lineage4.1.1.1 1
spoligotype Counts
spoligotype Count
None 137
Geographic prevalence
Country level data for this variant is available for 22 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR11068240 Sensitive lineage4.1 None
ERR4195798 Sensitive lineage4.1 None
ERR4811741 Sensitive lineage4.1.1 pe
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4821092 Sensitive lineage4.1 None
SRR27450403 Sensitive lineage4.1 None
ERR8975670 Other lineage4.1 None
DRR261050 Other lineage4.1 None
ERR6865889 Other lineage4.1.1 None
SRR6964485 Sensitive lineage1.1.2;lineage3 None
ERR11050277 Sensitive lineage4.1 None
DRR261117 Other lineage4.1 None
ERR987722 MDR-TB None
SRR28044323 Sensitive lineage3 None
ERR4822622 Sensitive lineage4.1.2.1 None
ERR4820379 Sensitive lineage4.1 None
ERR4822119 Sensitive lineage4.1 gb
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR5918069 HR-TB lineage4.1 za
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR9787014 RR-TB lineage6.1.1 None
ERR11043576 Sensitive lineage4.1 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR22048530 Sensitive lineage4.1 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3323722 Sensitive lineage4.1 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
DRR261032 Other lineage4.1 None
ERR7911451 Sensitive lineage4.1 za
ERR3799304 RR-TB lineage6.1.1 None
ERR4822053 Sensitive lineage4.1 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR3148062 MDR-TB lineage4.1 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR11043845 Sensitive lineage4.1 None
SRR10808615 Sensitive lineage4.1.1 None
SRR6964484 MDR-TB lineage3 None
ERR552508 Sensitive lineage4.1 de
ERR4188322 Other lineage4.6.4;lineage4.9 None
DRR261067 Other lineage4.1 None
SRR27450021 Other lineage3 None
ERR2515056 Sensitive lineage3 gb
DRR261193 Other lineage4.1 None
ERR4829270 Sensitive lineage4.1 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR11050885 Sensitive lineage4.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR11252426 Sensitive lineage4.1 None
ERR2510506 MDR-TB lineage3 pk
ERR2510517 Pre-XDR-TB lineage3 pk
ERR4822454 Sensitive lineage4.1.2.1 de
ERR6866317 Sensitive lineage4.1.1 None
ERR11067618 Sensitive lineage4.1 None
SRR6964649 MDR-TB lineage3 None
ERR4024532 Other lineage4.1.1 None
ERR3439432 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4798504 RR-TB lineage3 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4797918 Sensitive lineage3 in
ERR6866329 Sensitive lineage4.1.1 None
ERR8975363 Sensitive lineage4.1 None
ERR11050881 Sensitive lineage4.1 None
ERR11068486 Sensitive lineage4.1 None
SRR3675586 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
DRR261073 Other lineage4.1 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR7911470 Sensitive lineage4.1 za
ERR11068390 Sensitive lineage4.1 None
SRR10869019 Sensitive lineage4.1 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR11465114 Sensitive lineage4.1;lineage4.3.4.2.1 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR2101811 Other lineage4.1 None
ERR2145492 Sensitive lineage4.1 None
ERR11068265 Sensitive lineage4.1 None
ERR2516555 MDR-TB lineage4.1 nl
SRR21732309 Sensitive lineage3 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR11081047 Pre-XDR-TB lineage4.1 None
DRR261151 HR-TB lineage1.1.1.1;lineage4.1 None
ERR4817207 Sensitive lineage4.1 None
ERR11069119 Sensitive lineage4.1 None
SRR2101661 Sensitive lineage4.1 None
SRR7068992 Sensitive lineage3 None
ERR9121398 Sensitive lineage4.1 None
SRR7069705 Sensitive lineage3 None
ERR11068522 Sensitive lineage4.1 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR11043847 Sensitive lineage4.1 None
ERR7911764 Sensitive lineage4.1 za
ERR4821196 Sensitive lineage4.1 gb
ERR1034926 Sensitive lineage4.1 za
SRR21732917 Sensitive lineage4.1 None
SRR7131181 Sensitive lineage4.1 None
ERR3470587 Other lineage4.1 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR3470559 Sensitive lineage4.1 None
ERR11081114 Sensitive lineage4.1 None
ERR4808949 Sensitive lineage4.1 None
SRR6982226 Other lineage4.1 None
ERR11068221 Sensitive lineage4.1 None
SRR21277684 Sensitive lineage4.5 None
ERR11067999 Sensitive lineage4.1 None
SRR7069429 Sensitive lineage4.1 None
SRR1180226 HR-TB lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR4800284 Pre-XDR-TB lineage3 in
ERR9807024 Sensitive lineage4.1 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR7911681 Sensitive lineage4.1 za
DRR261056 Sensitive lineage4.1 None
ERR11050349 Sensitive lineage4.1 None
ERR2515070 Sensitive lineage3 gb
ERR2512462 Sensitive lineage3 gb
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR6982556 Other lineage4.1 None
SRR22048545 Sensitive lineage4.1 None
DRR261107 Other lineage4.1 None
ERR4831458 MDR-TB lineage3 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR26400053 Sensitive lineage4.1 None
ERR11044159 Sensitive lineage4.1 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4814862 Sensitive lineage4.1 gb
SRR3725688 Sensitive lineage4.1 None
ERR4820112 Sensitive lineage4.1.1.1 None
ERR2184403 Sensitive lineage4.1.1 pe
SRR1183111 HR-TB lineage4.9 None
ERR1034947 Sensitive lineage4.1 za