Rv0006 - c.-332C>T
Drug resistance types
4 Sensitive
0 RR-TB
71 HR-TB
7 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
32 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 3 |
| lineage4.9 | 7 |
| La1.8.1 | 2 |
| La1.7.1 | 1 |
| 74 | |
| lineage4.9;lineage4.6.3 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.3 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4 | 4 |
| lineage1.1 | 1 |
| lineage4.6.2.2 | 4 |
| lineage5.2 | 2 |
| La2 | 1 |
| lineage4.8 | 1 |
| lineage3.1.2 | 1 |
| La1 | 1 |
| lineage4.3.3 | 2 |
| lineage4.8;lineage4.1 | 2 |
| lineage6.1.3 | 1 |
| La3 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 116 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR1791696 | Other | La1.8.1 | None | SRR15296962 | Other | La1.7.1 | None | SRR1640750 | HR-TB | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | ERR181744 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | ERR161033 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR176751 | HR-TB | None | ERR176643 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675234 | Other | None | ERR176568 | Other | lineage4.3 | None | ERR212121 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3675545 | HR-TB | None | ERR212033 | HR-TB | None | ERR212123 | Other | None | SRR3732569 | Other | lineage4.1.2.1 | None | ERR234659 | HR-TB | None | ERR4816466 | HR-TB | None | ERR2693239 | HR-TB | None | SRR5341330 | HR-TB | None | ERR2693231 | Other | None | ERR2693230 | Other | None | ERR2693257 | Other | None | ERR2693254 | Other | None | SRR6045555 | HR-TB | None | SRR6045526 | HR-TB | None | ERR278594 | HR-TB | None | SRR6044890 | Other | lineage4.9 | None | SRR6046152 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046514 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6325442 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR5311081 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR323038 | HR-TB | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR294248 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR5311099 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323039 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR323041 | HR-TB | None | ERR323053 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR3797043 | HR-TB | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797014 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283017 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3797017 | Other | None | ERR3797036 | HR-TB | None | ERR4188350 | HR-TB | None | ERR3797061 | Other | None | ERR3797082 | Other | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR3797044 | Other | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798262 | HR-TB | La1 | None | ERR6358837 | HR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6358991 | HR-TB | None | ERR736835 | HR-TB | None | ERR736837 | Other | lineage4.9 | None | ERR8976043 | HR-TB | None | ERR736865 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR987722 | HR-TB | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786843 | Other | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9787153 | Other | lineage6.1.3 | None | SRR1169249 | Other | La3 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1172310 | HR-TB | None | SRR1169306 | Other | None | SRR1174897 | HR-TB | None |
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