Rv3596c - c.1680C>G
Drug resistance types
12 Sensitive
3 RR-TB
14 HR-TB
8 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 20 |
| lineage3 | 4 |
| lineage4.1 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La1.4 | 1 |
| lineage4.6.2.2 | 2 |
| 3 | |
| lineage3.1.3 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.8 | 2 |
| La2;lineage4.9 | 1 |
| lineage6.1.1 | 2 |
| lineage3.1.2.2 | 1 |
| lineage4 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage4.1.2.1 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.2.1 | 1 |
| lineage4.3.4 | 1 |
| lineage2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 52 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR067712 | Sensitive | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | ERR9786526 | Other | lineage4.1 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR16278274 | Other | La1.4 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR29096150 | Other | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR987722 | MDR-TB | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR502511 | Sensitive | lineage4.9 | None | ERR12015086 | RR-TB | lineage4.8 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9786525 | Other | lineage4 | None | ERR987729 | HR-TB | lineage3.1.2.1 | None | ERR212138 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR176675 | Sensitive | lineage4.3.4.2.1 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR4818561 | Sensitive | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR4829606 | Sensitive | lineage4.1.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR990545 | Other | lineage3 | None | ERR3273109 | HR-TB | lineage4 | None | ERR4769493 | Other | lineage4.9 | None | SRR29097026 | Other | lineage4.9 | None | ERR9786843 | Other | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | SRR7535082 | Sensitive | lineage4.9 | None | SRR29096410 | Other | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | ERR12015084 | Other | lineage4.8 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4798823 | HR-TB | None | SRR1183049 | RR-TB | lineage2.2 | None |
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