ERR502889
|
Other
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
|
None
|
ERR323047
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4819422
|
HR-TB
|
lineage4.9
|
None
|
SRR6045555
|
Other
|
lineage4.9
|
None
|
ERR9786604
|
Other
|
|
None
|
ERR323060
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4812752
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR502524
|
HR-TB
|
lineage4.9;lineage6.3
|
None
|
ERR4813449
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR29096410
|
Other
|
lineage4.9
|
None
|
ERR038268
|
HR-TB
|
La3;M.canetti;lineage4.8;lineage4.9
|
None
|
SRR19304036
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR2513082
|
Other
|
lineage4.1.2.1
|
gb
|
ERR4188342
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675508
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4178182
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR3283024
|
Other
|
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9
|
None
|
ERR4821410
|
Sensitive
|
lineage2.2.1
|
gb
|
ERR4816769
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6046460
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
ERR2693239
|
RR-TB
|
M.canetti;lineage2.1;lineage4
|
None
|
ERR3283026
|
HR-TB
|
lineage4.2;lineage4.6.3;lineage4.9.1
|
None
|
SRR14088352
|
Pre-XDR-TB
|
lineage1.2.2.2
|
None
|
ERR4811022
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR5311079
|
Other
|
La1.6;La3;M.canetti;lineage4.2;lineage4.9
|
None
|
ERR751582
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR772255
|
MDR-TB
|
lineage2.1;lineage4.3.2
|
None
|
ERR845937
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR30182375
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR751549
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR6046362
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
ERR4811142
|
RR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR5311100
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR5311101
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR124642
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
ERR2693231
|
Other
|
La1.6;La3;lineage4.6.4;lineage4.9
|
None
|
ERR2510170
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR6866863
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR5311103
|
RR-TB
|
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9
|
None
|
ERR323040
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4811105
|
HR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR15368973
|
Other
|
lineage4.9
|
None
|
ERR233384
|
Sensitive
|
lineage3
|
pt
|
SRR6046133
|
HR-TB
|
lineage4.9
|
None
|
ERR4813469
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR15368820
|
Sensitive
|
lineage4.4.2
|
None
|
ERR3797036
|
HR-TB
|
lineage2.1;lineage4.1.4;lineage4.9
|
None
|
SRR5217438
|
Sensitive
|
lineage2.2.1
|
None
|
SRR10040311
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6325447
|
MDR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
SRR16370489
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4811311
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4798406
|
MDR-TB
|
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
|
None
|
ERR212121
|
HR-TB
|
lineage4.9;lineage6.3
|
None
|
ERR278594
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR3283032
|
Other
|
lineage4.9
|
None
|
ERR117719
|
HR-TB
|
lineage1.2.2.2
|
None
|
ERR2510196
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4819877
|
HR-TB
|
lineage4.9
|
None
|
ERR126618
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4816466
|
HR-TB
|
lineage4.9
|
None
|
ERR1200638
|
Sensitive
|
lineage3
|
et
|
ERR158583
|
MDR-TB
|
La3;M.canetti;lineage2;lineage4.2;lineage4.3
|
None
|
ERR702404
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR176751
|
Other
|
lineage4.9
|
None
|
SRR21291131
|
Sensitive
|
lineage4.4.2
|
None
|
SRR29050859
|
Other
|
lineage4.9
|
None
|
SRR6045785
|
MDR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
ERR8976043
|
HR-TB
|
lineage2.1;lineage2.2;lineage6.3
|
None
|
SRR5341418
|
Other
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7
|
None
|
ERR4812356
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR1200658
|
Sensitive
|
lineage3
|
et
|
ERR403298
|
MDR-TB
|
M.canetti;lineage4.2
|
None
|
ERR323033
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR1873393
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR28409592
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4811493
|
HR-TB
|
lineage4.9
|
None
|
ERR987722
|
MDR-TB
|
|
None
|
SRR6325442
|
HR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
ERR270674
|
HR-TB
|
lineage1.2.2.2
|
None
|
ERR6359045
|
Other
|
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
|
None
|
SRR8552928
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR473314
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR124652
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3287570
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR6046295
|
HR-TB
|
lineage4.2;lineage4.9
|
None
|
ERR3287472
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR1180226
|
HR-TB
|
lineage4.9
|
None
|
SRR29231479
|
RR-TB
|
lineage4.9
|
None
|
ERR4188322
|
Other
|
lineage4.6.4;lineage4.9
|
None
|
ERR736865
|
HR-TB
|
lineage4.3.2;lineage4.9
|
None
|
ERR736835
|
HR-TB
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR6046397
|
Other
|
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
SRR3675568
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
ERR5311097
|
Sensitive
|
lineage4.2;lineage4.6.3;lineage4.9
|
None
|
ERR133986
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
|
None
|
SRR6855759
|
Sensitive
|
lineage4.8
|
None
|
ERR6358837
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR12062505
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR23961558
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR176658
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4024763
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4818929
|
HR-TB
|
lineage4.9
|
None
|
ERR1035239
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675571
|
HR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
SRR7069347
|
Other
|
lineage4.1.2.1
|
None
|
ERR2693257
|
Other
|
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9
|
None
|
ERR387051
|
Other
|
lineage4.9
|
None
|
ERR4819749
|
Sensitive
|
lineage3
|
None
|
ERR4813554
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2510224
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR13267567
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR4811075
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR7898214
|
HR-TB
|
lineage1.1.2
|
in
|
SRR3675520
|
Other
|
La1.7.X-unk4;lineage4.9
|
None
|
ERR6865980
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR6866333
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR12062506
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR323034
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage3.1
|
None
|
SRR28393308
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR3797017
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
ERR473277
|
HR-TB
|
La3;M.canetti;lineage4.9
|
None
|
ERR4820773
|
HR-TB
|
lineage4.9
|
None
|
ERR775342
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR126608
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3797061
|
Other
|
La1.6;La3;lineage4.9
|
None
|
SRR6325445
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR4024759
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR775351
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR18910194
|
HR-TB
|
lineage2.2.2
|
None
|
SRR3675216
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR6865978
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR6045219
|
HR-TB
|
lineage4.9
|
None
|
ERR161037
|
Other
|
lineage4.9
|
None
|
ERR294266
|
HR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
ERR779885
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
ERR2510202
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR2693230
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
SRR11662692
|
Sensitive
|
lineage2.2.1
|
None
|
ERR6866134
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR11043200
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR4817731
|
HR-TB
|
lineage4.9
|
None
|
SRR6046824
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
ERR5311096
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR5311102
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1183111
|
HR-TB
|
lineage4.9
|
None
|
ERR751666
|
Sensitive
|
lineage2.2.1
|
th
|
SRR3675234
|
Other
|
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
SRR28351540
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR5311090
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4798262
|
HR-TB
|
La1.2.BCG
|
None
|
ERR323038
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3797014
|
Other
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
ERR386953
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR11662690
|
HR-TB
|
lineage4.9
|
None
|
ERR4813666
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR6325448
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR26159047
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
ERR234659
|
Other
|
|
None
|
ERR126600
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR12142341
|
HR-TB
|
lineage2.1
|
None
|
ERR12117916
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR3675586
|
Other
|
M.canetti;lineage4.6.4;lineage4.9
|
None
|
ERR9786694
|
Other
|
lineage4.1.2.1
|
None
|
ERR1034652
|
Other
|
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
|
None
|
SRR6045952
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR7910871
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR13267580
|
Sensitive
|
lineage3
|
None
|
ERR181744
|
HR-TB
|
La3;lineage4.9
|
None
|
SRR2100370
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR29097026
|
Other
|
lineage4.9
|
None
|
ERR4810741
|
HR-TB
|
La3;lineage2.1;lineage6.3
|
None
|
SRR18914175
|
MDR-TB
|
lineage2.2.1;lineage4.4.2
|
None
|
ERR323063
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR067681
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR25207299
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR323058
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3797044
|
Other
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9
|
None
|
SRR6046514
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR386923
|
HR-TB
|
lineage1.2.2.2
|
None
|
ERR2512750
|
Sensitive
|
lineage1.2.2.2
|
gb
|
ERR294248
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR5311083
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR11662696
|
MDR-TB
|
La1.6;La3;M.canetti;lineage4.2.2
|
None
|
ERR11080973
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2693245
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
ERR124651
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
ERR4821053
|
RR-TB
|
lineage3
|
None
|
ERR10465862
|
Sensitive
|
lineage2.2.1
|
None
|
SRR3675550
|
RR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
ERR8773625
|
Sensitive
|
lineage2.2.1
|
None
|
SRR12199394
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6797559
|
Other
|
lineage1.2.2.2
|
None
|
ERR278564
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR3675574
|
Other
|
lineage4.6.3;lineage4.9;lineage6.3
|
None
|
ERR4812064
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2693254
|
Other
|
La1.6;La3;lineage4.9
|
None
|
ERR2515694
|
Sensitive
|
lineage4.8
|
za
|
ERR323064
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR161033
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR9786617
|
Other
|
lineage4.1.1.1
|
None
|
ERR161039
|
HR-TB
|
La3;lineage4.3.4
|
None
|
ERR11043240
|
Sensitive
|
lineage3
|
None
|
ERR3283020
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6046720
|
HR-TB
|
lineage4.9;lineage9
|
None
|
ERR4829756
|
MDR-TB
|
lineage4.3.4.2
|
it
|
SRR3675481
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4815441
|
HR-TB
|
lineage4.9
|
None
|
ERR1035162
|
Other
|
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
|
None
|
SRR29096150
|
Other
|
lineage4.9
|
None
|
ERR1023295
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.2.1
|
None
|
SRR29440925
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4816478
|
HR-TB
|
lineage4
|
None
|
SRR6325444
|
MDR-TB
|
M.canetti;lineage2.1;lineage6.3
|
None
|
SRR8217918
|
HR-TB
|
lineage4.9
|
None
|
SRR3675518
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR4816656
|
Other
|
lineage4.9
|
None
|
ERR6865735
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2510217
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR3675450
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR752144
|
Sensitive
|
lineage2.2.1
|
th
|
ERR4831117
|
HR-TB
|
lineage4.9;lineage7
|
None
|
ERR775350
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR6046225
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR8773624
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6046485
|
Other
|
lineage4.9
|
None
|
ERR323054
|
MDR-TB
|
La3;M.canetti;lineage3.1
|
None
|
ERR4813630
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR3287572
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4814536
|
MDR-TB
|
M.canetti;lineage2.1;lineage3
|
None
|
ERR3287573
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR6046026
|
RR-TB
|
lineage4.2;lineage4.9
|
None
|
SRR1165584
|
Other
|
lineage4.1.2.1
|
None
|
SRR3675554
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR176560
|
HR-TB
|
La1.7;lineage4.9
|
None
|
SRR3675390
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
ERR4829130
|
Pre-XDR-TB
|
lineage1.2.2.2
|
pk
|
ERR751482
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR751565
|
MDR-TB
|
lineage4.3.4.2
|
pe
|