Rv2764c - c.111T>C


Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
27 Sensitive 6 RR-TB 73 HR-TB 76 MDR-TB 7 Pre-XDR-TB 1 XDR-TB 50 Other
lineage Counts
lineage Count
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
lineage4.9 28
lineage4 1
M.canetti;lineage2.1;lineage6.3 1
lineage2.2.1 20
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.1.1.1 2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.9 14
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
M.canetti;lineage4.2 1
La3;M.canetti;lineage3.1 1
lineage4.2;lineage4.9 2
lineage4.1.2.1 5
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage4.3.4.2 42
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.3.2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9 9
lineage4.9;lineage6.3 3
lineage2.1;lineage4.9;lineage6.3 3
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.8 2
lineage1.2.2.2 9
lineage2.1;lineage4.9 3
La1.7.X-unk4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.6;La3;lineage4.9 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 3
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage3 8
8
lineage4.9;lineage9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage3.1.3 1
lineage4.9;lineage7 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage4.6.4;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage1.1.2 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage4.8;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 2
lineage2.2.1;lineage4.4.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La1.6;La3;M.canetti;lineage4.2.2 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.4.2 2
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.1.1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage2.1;lineage3 1
La1.7;lineage4.9 1
lineage4.6.3;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
M.canetti;lineage4.6.4;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 1
La3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage4 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
La3;M.canetti;lineage2.1;lineage3.1 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.3.4 1
lineage4.3.2 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.2 1
spoligotype Counts
spoligotype Count
None 240
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4817731 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR4816656 Other lineage4.9 None
SRR6325447 HR-TB lineage4.1.1.1 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR176751 Other lineage4.9 None
ERR13272797 Sensitive lineage2.2.1 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR29385409 MDR-TB lineage2.2.1 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR6046485 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR28409592 MDR-TB lineage2.2.1 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
ERR4811493 HR-TB lineage4.9 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3287472 MDR-TB lineage4.3.4.2 pe
ERR3287570 MDR-TB lineage4.3.4.2 None
ERR7910871 MDR-TB lineage4.3.4.2 pe
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR4829756 MDR-TB lineage4.3.4.2 it
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR29096410 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR7069347 Other lineage4.1.2.1 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR387051 Other lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2515694 Sensitive lineage4.8 za
ERR386923 HR-TB lineage1.2.2.2 None
ERR4813554 MDR-TB lineage4.3.4.2 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4829130 Pre-XDR-TB lineage1.2.2.2 pk
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR12062506 Pre-XDR-TB lineage2.2.1 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR10465862 Sensitive lineage2.2.1 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR8773625 Sensitive lineage2.2.1 None
SRR12199394 HR-TB lineage2.2.1 None
ERR3797061 Other La1.6;La3;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR233384 Sensitive lineage3 pt
ERR1200658 Sensitive lineage3 et
ERR1200638 Sensitive lineage3 et
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR13267465 MDR-TB lineage4.3.4.2 None
ERR212123 Other lineage4.9 None
ERR4821053 Other lineage3 None
ERR4810741 HR-TB None
ERR11043240 Sensitive lineage3 None
SRR5217438 Sensitive lineage2.2.1 None
SRR10040311 Pre-XDR-TB lineage2.2.1 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR9786694 Other lineage4.1.2.1 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR13267567 Sensitive lineage4.1.2.1 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR6865735 MDR-TB lineage4.3.4.2 None
SRR29096793 Sensitive lineage3.1.3 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR14088352 Pre-XDR-TB lineage1.2.2.2 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4813630 Pre-XDR-TB lineage4.3.4.2 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR752144 Sensitive lineage2.2.1 th
ERR751549 MDR-TB lineage4.3.4.2 pe
ERR4813449 MDR-TB lineage4.3.4.2 pe
ERR234659 Other None
ERR270674 HR-TB lineage1.2.2.2 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR751582 MDR-TB lineage4.3.4.2 pe
ERR775351 MDR-TB lineage4.3.4.2 pe
ERR775350 MDR-TB lineage4.3.4.2 pe
ERR751565 MDR-TB lineage4.3.4.2 pe
ERR779885 MDR-TB lineage4.3.4.2 pe
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR7898214 HR-TB lineage1.1.2 in
ERR9786604 Other None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR18914175 MDR-TB lineage2.2.1;lineage4.4.2 None
ERR4816769 Sensitive lineage2.2.1 None
ERR4819749 Sensitive lineage3 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR278564 HR-TB lineage1.2.2.2 None
ERR4024759 MDR-TB lineage4.3.4.2 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR25207299 Pre-XDR-TB lineage2.2.1 None
SRR15368973 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR4812064 MDR-TB lineage4.3.4.2 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4811142 RR-TB None
SRR15368820 Sensitive lineage4.4.2 None
ERR4811075 Other None
ERR4811311 Other None
ERR9786617 Other lineage4.1.1.1 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.2.1 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR3283032 Other lineage4.9 None
SRR11662692 Sensitive lineage2.2.1 None
ERR6866134 MDR-TB lineage4.3.4.2 None
ERR11043200 Sensitive lineage4.1.2.1 None
SRR6325442 HR-TB lineage4.1.1;lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR29096150 Other lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29097026 Other lineage4.9 None
SRR21291131 Sensitive lineage4.4.2 None
SRR1183111 HR-TB lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR28351540 Pre-XDR-TB lineage3 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR8773624 Sensitive lineage2.2.1 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR11662690 HR-TB lineage4.9 None
ERR4813666 MDR-TB lineage4.3.4.2 None
ERR4813469 MDR-TB lineage4.3.4.2 pe
ERR751666 Sensitive lineage2.2.1 th
ERR176560 HR-TB La1.7;lineage4.9 None
ERR3287572 MDR-TB lineage4.3.4.2 None
ERR3287573 MDR-TB lineage4.3.4.2 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR775342 MDR-TB lineage4.3.4.2 pe
ERR751482 MDR-TB lineage4.3.4.2 pe
ERR987722 MDR-TB None
ERR845937 MDR-TB lineage4.3.4.2 pe
ERR4812752 MDR-TB lineage4.3.4.2 pe
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1180226 HR-TB lineage4.9 None
SRR2100370 HR-TB lineage1.2.2.2 None
ERR2510217 MDR-TB lineage4.3.4.2 pe
ERR2510202 MDR-TB lineage4.3.4.2 pe
ERR2510196 MDR-TB lineage4.3.4.2 pe
ERR2510224 MDR-TB lineage4.3.4.2 pe
ERR2510170 MDR-TB lineage4.3.4.2 pe
ERR4812356 MDR-TB lineage4.3.4.2 pe
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR6855759 Sensitive lineage4.8 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR12062505 XDR-TB lineage2.2.1 None
ERR12117916 MDR-TB lineage4.3.4.2 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR13267580 Sensitive lineage3 None
ERR181744 HR-TB La3;lineage4.9 None
ERR4024763 MDR-TB lineage4.3.4.2 None
ERR4818929 HR-TB lineage4.9 None
ERR4178182 MDR-TB lineage4.3.4.2 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR6865980 MDR-TB lineage4.3.4.2 None
ERR6866333 MDR-TB lineage4.3.4.2 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR28393308 MDR-TB lineage4.3.4.2 None
ERR11080973 Sensitive lineage2.2.1 None
ERR4820773 HR-TB lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6797559 Other lineage1.2.2.2 None
ERR6866863 MDR-TB lineage4.3.4.2 None
ERR6865978 MDR-TB lineage4.3.4.2 None
ERR161039 Sensitive lineage4.3.4 None
SRR29050859 Other lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR4811105 HR-TB None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR30182375 Sensitive lineage1.2.2.2 None
ERR772255 MDR-TB lineage4.3.2 None
ERR161037 Other lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR16370489 MDR-TB lineage4.3.4.2 None
ERR4815441 HR-TB lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR8976043 HR-TB lineage2.2 None
ERR13260115 MDR-TB lineage4.3.4.2 None
ERR117719 HR-TB lineage1.2.2.2 None
ERR4819877 HR-TB lineage4.9 None
SRR29440925 Sensitive lineage2.2.1 None