lineage | Count |
---|---|
81 | |
lineage4.1.2 | 1 |
lineage4 | 15 |
lineage4.1.2.1 | 1 |
La1.8.1 | 1 |
lineage4.9 | 2 |
La1 | 1 |
lineage1.1.2 | 1 |
lineage3.1.2 | 1 |
lineage2.2.1 | 1 |
lineage3 | 2 |
lineage4.4.1.1 | 1 |
lineage4.6.1.1 | 1 |
lineage4.1 | 1 |
lineage4.9;lineage4.6.3 | 1 |
lineage4.3 | 1 |
lineage1.2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 113 |
ID | Drug resistance | Lineage | Country iso2 | ERR5311081 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323039 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323038 | HR-TB | None | ERR323085 | Sensitive | lineage4 | None | ERR323053 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR3283017 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1034652 | Other | None | ERR1063883 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283031 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797082 | Other | lineage4.9 | None | ERR4188350 | HR-TB | None | ERR4188247 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR4769452 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769521 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4798431 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR6358979 | Other | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799025 | Pre-XDR-TB | None | ERR6358837 | HR-TB | None | ERR6866547 | Sensitive | lineage4 | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6866410 | Sensitive | None | ERR736835 | HR-TB | None | SRR18213931 | Other | lineage3 | None | ERR736865 | HR-TB | None | ERR987722 | HR-TB | None | SRR10809074 | Sensitive | lineage4 | None | SRR1172310 | HR-TB | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1174897 | HR-TB | None | ERR736839 | Other | None | ERR8976043 | HR-TB | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR10808805 | Sensitive | None | SRR14782405 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR6325445 | HR-TB | None | SRR3675488 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675222 | Other | None | ERR176643 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675270 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675383 | HR-TB | None | ERR212034 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212121 | HR-TB | None | SRR6045503 | HR-TB | None | ERR4816466 | HR-TB | None | SRR5341470 | HR-TB | None | ERR2693239 | HR-TB | None | SRR3675571 | HR-TB | None | ERR2512525 | Sensitive | lineage1.2.2.2 | None | SRR5341469 | Other | lineage4 | None | SRR6045519 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | ERR278594 | HR-TB | None | ERR270760 | Other | lineage3 | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | SRR6325442 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6046046 | Other | None | SRR6046225 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046397 | Other | None | SRR6046482 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046492 | Other | None | SRR6046514 | HR-TB | None | SRR6325447 | HR-TB | None |
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