EBG00000313325 - n.601_604delTCTC
Drug resistance types
7 Sensitive
0 RR-TB
24 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
7 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage2.2.1 | 6 |
| 17 | |
| lineage4 | 3 |
| lineage4.9 | 3 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3.4.1 | 2 |
| La2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 41 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR17832802 | HR-TB | lineage3 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR4818929 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR176740 | HR-TB | None | ERR4816656 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR4818536 | Other | lineage4.9 | None | SRR5341470 | HR-TB | None | ERR4819462 | Other | lineage4 | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6046397 | Other | None | SRR6046644 | HR-TB | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR502524 | HR-TB | La2 | None | ERR323039 | HR-TB | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR323053 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR405209 | Sensitive | lineage4 | None | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR3797036 | HR-TB | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | SRR26936983 | MDR-TB | lineage2.2.1 | None | ERR736835 | HR-TB | None | ERR736865 | HR-TB | None | SRR1172214 | HR-TB | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987722 | HR-TB | None | SRR1174897 | HR-TB | None | SRR1172310 | HR-TB | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR1180172 | Other | lineage2.2.1 | None |
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