EBG00000313325 - n.601_604delTCTC
Drug resistance types
6 Sensitive
1 RR-TB
19 HR-TB
7 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage9 | 2 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.9 | 13 |
| lineage3.1.2.2 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage2.2.1 | 5 |
| lineage4.4.1.2 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La2;lineage4.9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage2.2.1.1 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 42 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | SRR26936983 | MDR-TB | lineage2.2.1 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR4816656 | Other | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None |
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