Rv3245c - c.-230G>A

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
18 Sensitive 2 RR-TB 29 HR-TB 6 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 16 Other
lineage Counts
lineage Count
M.canetti;lineage1 1
lineage4.9 37
lineage4.9;lineage6.3 2
lineage3.1.2.1 1
lineage4.1.2 1
lineage4.3.4.1 1
La1.7;lineage4.9 2
2
lineage1;lineage4.9 1
lineage4.4.1.2 1
lineage3.1.2.2 1
La1.7.1;La1.7.X-unk4 1
lineage4.9;lineage9 3
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;lineage4.9;lineage7 3
lineage4.6.3;lineage4.9 2
La2;lineage4.9 1
lineage3 1
lineage2.2.1 2
La1.7.1;lineage4.9 1
La2;lineage4.9;lineage9 1
La1;lineage4.9 1
lineage1.1.3.1 1
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
M.canetti;lineage4.9;lineage9 1
spoligotype Counts
spoligotype Count
None 71
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR15014655 Other M.canetti;lineage1 None
ERR926161 Sensitive lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR926163 Other lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1 None
ERR926154 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
SRR9970978 Sensitive lineage4.1.2 None
SRR29096150 Other lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR29097026 Other lineage4.9 None
ERR779852 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR987722 MDR-TB None
ERR181824 HR-TB lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR926155 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR736848 Other lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR6358991 HR-TB None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR176779 HR-TB lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR176778 HR-TB lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR926157 Sensitive lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR323107 Sensitive lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR4798504 RR-TB lineage3 None
SRR28239913 Sensitive lineage2.2.1 None
SRR29231479 RR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR926164 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR176751 Other lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR29096410 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR4810624 HR-TB lineage2.2.1 None
ERR926158 Sensitive lineage4.9 None