lineage | Count |
---|---|
lineage4.1.2.1 | 1 |
lineage4.1 | 1 |
lineage4 | 40 |
lineage4.3.2.1 | 1 |
La2 | 1 |
lineage4.1.2 | 1 |
92 | |
lineage4.4.1.2 | 1 |
lineage2.2 | 1 |
lineage4.9 | 13 |
lineage6.1.1 | 2 |
lineage2.2.1 | 4 |
La1 | 1 |
lineage3.1.2 | 1 |
lineage1.1.3.1 | 1 |
lineage4.8 | 2 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage6.1.3 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.9;lineage4.6.3 | 1 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage4.3 | 1 |
lineage4.9;lineage2.1 | 1 |
lineage2.2.1.1 | 1 |
spoligotype | Count |
---|---|
None | 171 |
ID | Drug resistance | Lineage | Country iso2 | ERR11465351 | Sensitive | lineage4.1.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR502524 | HR-TB | La2 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | ERR323039 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323053 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323085 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063862 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063896 | Sensitive | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283025 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283058 | Other | lineage4.9 | None | ERR3445503 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3597003 | Sensitive | None | ERR3597005 | Sensitive | None | ERR3597001 | Sensitive | None | ERR3597002 | Sensitive | None | ERR3597007 | Sensitive | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3797064 | Sensitive | None | ERR3797086 | Other | lineage4.9 | None | ERR387051 | HR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4024991 | Other | None | ERR4769450 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769521 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4798262 | HR-TB | La1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799378 | Sensitive | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR6866022 | Other | None | ERR6358991 | HR-TB | None | ERR6866639 | Other | None | ERR7451300 | Sensitive | None | ERR736848 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR7451301 | Sensitive | None | ERR751326 | Sensitive | lineage4 | None | ERR9119669 | HR-TB | None | ERR9125480 | Sensitive | None | ERR9634265 | Sensitive | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9786444 | Sensitive | lineage4.8 | None | SRR1174897 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1172310 | HR-TB | None | ERR9787153 | Other | lineage6.1.3 | None | ERR987722 | HR-TB | None | SRR1158918 | Sensitive | lineage4 | None | SRR1167384 | Other | lineage4 | None | SRR1173777 | Other | lineage4 | None | SRR14801749 | Sensitive | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR24061600 | Sensitive | None | SRR16058668 | Sensitive | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR21277793 | Sensitive | lineage2.2.1 | None | SRR24061598 | Sensitive | None | SRR22179528 | Sensitive | None | SRR24061599 | Sensitive | None | ERR176778 | HR-TB | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | ERR176779 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4815361 | Sensitive | None | ERR181744 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | ERR181824 | HR-TB | lineage4 | None | ERR176568 | Other | lineage4.3 | None | SRR3675270 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR181887 | HR-TB | None | ERR176643 | HR-TB | None | ERR176651 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675510 | Other | None | ERR176751 | HR-TB | None | SRR3675456 | HR-TB | None | ERR4816019 | Sensitive | None | ERR212121 | HR-TB | None | ERR212033 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212123 | Other | None | ERR212125 | HR-TB | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4817181 | Sensitive | None | SRR5341384 | Sensitive | lineage4.9 | None | SRR5818653 | Sensitive | dj | ERR4818110 | Sensitive | lineage4.9 | None | ERR4819051 | Other | lineage4 | None | SRR5818614 | Sensitive | dj | SRR5818676 | Sensitive | dj | SRR5818652 | Sensitive | dj | SRR5818661 | Sensitive | dj | SRR5818668 | Sensitive | dj | SRR5818567 | Sensitive | dj | SRR5341453 | Sensitive | None | ERR4818929 | HR-TB | None | ERR4818607 | Sensitive | lineage4.9 | None | SRR5341387 | Other | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341425 | Other | lineage4 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819927 | Sensitive | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5341470 | HR-TB | None | SRR5341469 | Other | lineage4 | None | ERR4821046 | Sensitive | None | ERR2693227 | Other | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045555 | HR-TB | None | SRR5818685 | Sensitive | None | SRR6046133 | HR-TB | None | SRR5818605 | Sensitive | None | SRR6046594 | HR-TB | lineage4 | None | SRR6044780 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045053 | Other | None | SRR6046210 | Other | lineage4 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6045892 | Sensitive | None | SRR6045010 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6046878 | HR-TB | lineage4 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6511621 | HR-TB | None |
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