Rv1173 - c.882C>T


Drug resistance types
72 Sensitive 4 RR-TB 17 HR-TB 9 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 13 Other
lineage Counts
lineage Count
lineage1.2.1.2.1 76
lineage4.4.2 5
lineage4.2;lineage4.8.1;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
lineage1.2.1.2.1;lineage2.2.1 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage4.9 1
lineage3 3
La3;lineage4.9 3
lineage2.2.1 1
lineage4.9 7
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2.2 1
lineage2.2.1.1 1
lineage4.9;lineage6.3 2
M.canetti;lineage4.2;lineage4.9 1
lineage4.3.2;lineage4.9 1
lineage4.2;lineage4.9 3
1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.6.3;lineage4.9 1
lineage3.1.2.2 1
lineage4.1.2.1 1
spoligotype Counts
spoligotype Count
None 117
Geographic prevalence
Country level data for this variant is available for 12 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR12006613 Sensitive lineage1.2.1.2.1 None
SRR7496552 HR-TB lineage1.2.1.2.1 us
SRR1172977 Sensitive lineage1.2.1.2.1 None
SRR22251801 Sensitive lineage1.2.1.2.1 None
SRR22251358 Sensitive lineage1.2.1.2.1 None
ERR9124999 Sensitive lineage4.4.2 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR12006514 Sensitive lineage1.2.1.2.1 None
SRR12006573 Sensitive lineage1.2.1.2.1 None
SRR21732532 Sensitive lineage1.2.1.2.1 None
SRR22249374 Sensitive lineage1.2.1.2.1 None
SRR12006610 Sensitive lineage1.2.1.2.1 None
SRR16058504 HR-TB lineage1.2.1.2.1 None
SRR6152683 Sensitive lineage1.2.1.2.1 ca
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR9125377 HR-TB lineage1.2.1.2.1 None
SRR1172934 Sensitive lineage1.2.1.2.1;lineage2.2.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR6336798 Sensitive lineage1.2.1.2.1 None
ERR6336803 Sensitive lineage1.2.1.2.1 None
SRR12882755 Sensitive lineage1.2.1.2.1 None
SRR21690338 Sensitive lineage1.2.1.2.1 None
SRR13591413 Sensitive lineage1.2.1.2.1 None
SRR12006641 Sensitive lineage1.2.1.2.1 None
ERR4798504 RR-TB lineage3 None
ERR3256264 MDR-TB lineage1.2.1.2.1 ph
SRR14519716 Sensitive lineage1.2.1.2.1 None
SRR22251768 Sensitive lineage1.2.1.2.1 None
ERR9125497 Sensitive lineage1.2.1.2.1 None
SRR16058649 Sensitive lineage1.2.1.2.1 None
SRR1169306 Other La3;lineage4.9 None
ERR502912 Other lineage2.2.1 None
SRR12006709 Sensitive lineage1.2.1.2.1 None
SRR12416843 MDR-TB lineage1.2.1.2.1 None
SRR27450315 Sensitive lineage1.2.1.2.1 None
SRR3675248 Other lineage4.9 None
SRR13591418 Sensitive lineage1.2.1.2.1 None
SRR16058343 HR-TB lineage1.2.1.2.1 None
SRR1573724 Sensitive lineage4.4.2 None
SRR1573705 Sensitive lineage4.4.2 None
SRR22251252 Sensitive lineage1.2.1.2.1 None
ERR3275373 Sensitive lineage1.2.1.2.1 nl
ERR9125869 Sensitive lineage1.2.1.2.1 None
SRR22249634 Sensitive lineage1.2.1.2.1 None
SRR14520004 HR-TB lineage1.2.1.2.1 None
SRR12006532 Sensitive lineage1.2.1.2.1 None
SRR12006653 Sensitive lineage1.2.1.2.1 None
SRR1173643 Sensitive lineage1.2.1.2.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR12882756 Sensitive lineage1.2.1.2.1 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR11050892 HR-TB lineage1.2.1.2.1 None
ERR3797029 Other lineage4.9 None
SRR6824512 HR-TB lineage1.2.1.2.1 cn
SRR18910194 HR-TB lineage2.2.2 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR9125368 Sensitive lineage1.2.1.2.1 None
SRR16058463 Sensitive lineage1.2.1.2.1 None
SRR1167384 Other La3;lineage4.9 None
SRR26112241 Sensitive lineage1.2.1.2.1 None
ERR11044436 Sensitive lineage1.2.1.2.1 None
SRR12006541 Sensitive lineage1.2.1.2.1 None
ERR9124969 Sensitive lineage4.4.2 None
SRR16058475 Sensitive lineage1.2.1.2.1 None
SRR12006574 Sensitive lineage1.2.1.2.1 None
SRR6153237 Sensitive lineage1.2.1.2.1 ca
SRR22250118 Sensitive lineage1.2.1.2.1 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR3256270 Pre-XDR-TB lineage1.2.1.2.1 ph
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR16058514 Sensitive lineage1.2.1.2.1 None
SAMN02599055 Sensitive lineage1.2.1.2.1 in
SRR21732439 Sensitive lineage1.2.1.2.1 None
ERR11050289 Sensitive lineage1.2.1.2.1 None
SRR12006616 Sensitive lineage1.2.1.2.1 None
SRR21732531 Sensitive lineage1.2.1.2.1 None
SRR12006619 Sensitive lineage1.2.1.2.1 None
SRR12006694 Sensitive lineage1.2.1.2.1 None
SRR16089907 Sensitive lineage1.2.1.2.1 None
ERR6336719 Sensitive lineage1.2.1.2.1 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
SRR12006565 Sensitive lineage1.2.1.2.1 None
SRR14519850 Sensitive lineage1.2.1.2.1 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR12006658 Sensitive lineage1.2.1.2.1 None
SRR22249894 Sensitive lineage1.2.1.2.1 None
SRR6045503 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR2514692 Other None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR26056430 Sensitive lineage1.2.1.2.1 None
ERR2517270 Sensitive lineage1.2.1.2.1 nl
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR212033 Other lineage4.9 None
ERR9125394 HR-TB lineage1.2.1.2.1 None
ERR9896144 Other lineage3 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
ERR4817010 Sensitive lineage1.2.1.2.1 None
SRR22251520 Sensitive lineage1.2.1.2.1 None
ERR7902692 Sensitive lineage1.2.1.2.1 None
SRR12006623 Sensitive lineage1.2.1.2.1 None
SRR6045526 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR27450353 Sensitive lineage1.2.1.2.1 None
ERR2446359 Sensitive lineage1.2.1.2.1 nl
ERR6336806 Sensitive lineage1.2.1.2.1 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR6045218 Sensitive lineage1.2.1.2.1 gb
SRR1175026 Sensitive lineage1.2.1.2.1;lineage2.2.1 None
ERR176751 HR-TB lineage4.9 None
SRR7496478 Sensitive lineage1.2.1.2.1 us
SRR1573710 Sensitive lineage4.4.2 None