lineage | Count |
---|---|
lineage1.2.1.2.1 | 78 |
lineage2.2.1 | 2 |
25 | |
lineage4.9 | 3 |
lineage2.2.1.1 | 1 |
La2 | 1 |
La1.8.1 | 1 |
lineage3 | 3 |
lineage3.1.2 | 1 |
lineage4.4.2 | 6 |
lineage4.1.2.1 | 1 |
lineage2.2.1;lineage1.2.1.2.1 | 2 |
La3 | 1 |
lineage4 | 1 |
lineage2.2 | 1 |
lineage4.9;lineage4.6.3 | 1 |
lineage4.3 | 1 |
spoligotype | Count |
---|---|
None | 129 |
ID | Drug resistance | Lineage | Country iso2 | ERR2446359 | Sensitive | lineage1.2.1.2.1 | nl | ERR2514821 | Other | lineage2.2.1 | None | SRR6152683 | Sensitive | lineage1.2.1.2.1 | ca | ERR2514692 | Other | None | SRR6045327 | HR-TB | None | SRR6045503 | HR-TB | None | SRR6045526 | HR-TB | None | SRR5341470 | HR-TB | None | SAMN02599055 | Sensitive | lineage1.2.1.2.1 | in | ERR3256264 | MDR-TB | lineage1.2.1.2.1 | ph | ERR3256270 | Pre-XDR-TB | lineage1.2.1.2.1 | ph | ERR2517270 | Sensitive | lineage1.2.1.2.1 | nl | SRR6046611 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR294266 | HR-TB | None | ERR11044436 | Sensitive | lineage1.2.1.2.1 | None | ERR502524 | HR-TB | La2 | None | ERR323053 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR323039 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR4188247 | HR-TB | None | ERR4811493 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR6336803 | Other | lineage1.2.1.2.1 | None | ERR6336719 | Sensitive | lineage1.2.1.2.1 | None | ERR6358991 | HR-TB | None | ERR6336806 | Sensitive | lineage1.2.1.2.1 | None | ERR6336798 | Sensitive | lineage1.2.1.2.1 | None | ERR736835 | HR-TB | None | SRR22249374 | Sensitive | lineage1.2.1.2.1 | None | ERR736865 | HR-TB | None | SRR22249634 | Sensitive | lineage1.2.1.2.1 | None | SRR22250118 | Sensitive | lineage1.2.1.2.1 | None | SRR22249894 | Sensitive | lineage1.2.1.2.1 | None | SRR22251768 | Sensitive | lineage1.2.1.2.1 | None | ERR7902692 | Sensitive | lineage1.2.1.2.1 | None | SRR22251252 | Sensitive | lineage1.2.1.2.1 | None | SRR22251358 | Sensitive | lineage1.2.1.2.1 | None | ERR9124968 | Sensitive | lineage4.4.2 | None | SRR21732531 | Sensitive | lineage1.2.1.2.1 | None | SRR26112241 | Sensitive | lineage1.2.1.2.1 | None | SRR22251520 | Sensitive | lineage1.2.1.2.1 | None | ERR9124969 | Sensitive | lineage4.4.2 | None | ERR9125377 | HR-TB | lineage1.2.1.2.1 | None | ERR9124999 | Sensitive | lineage4.4.2 | None | ERR9125368 | Sensitive | lineage1.2.1.2.1 | None | ERR9125394 | HR-TB | lineage1.2.1.2.1 | None | ERR9125497 | Sensitive | lineage1.2.1.2.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9125869 | Sensitive | lineage1.2.1.2.1 | None | ERR9125859 | Sensitive | lineage1.2.1.2.1 | None | SRR1172934 | Sensitive | lineage2.2.1;lineage1.2.1.2.1 | None | ERR9896144 | Other | lineage3 | None | SRR1169249 | Other | La3 | None | SRR1172310 | HR-TB | None | ERR987722 | HR-TB | None | ERR11050289 | Sensitive | lineage1.2.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1172977 | Sensitive | lineage1.2.1.2.1 | None | SRR1174897 | HR-TB | None | SRR1173643 | Sensitive | lineage1.2.1.2.1 | None | SRR1175026 | Sensitive | lineage2.2.1;lineage1.2.1.2.1 | None | SRR12006532 | Sensitive | lineage1.2.1.2.1 | None | SRR12006514 | Sensitive | lineage1.2.1.2.1 | None | SRR12006541 | Sensitive | lineage1.2.1.2.1 | None | SRR12006574 | Sensitive | lineage1.2.1.2.1 | None | SRR12006565 | Sensitive | lineage1.2.1.2.1 | None | SRR12006573 | Sensitive | lineage1.2.1.2.1 | None | SRR12006613 | Sensitive | lineage1.2.1.2.1 | None | SRR12006619 | Sensitive | lineage1.2.1.2.1 | None | SRR12006616 | Sensitive | lineage1.2.1.2.1 | None | SRR12006610 | Sensitive | lineage1.2.1.2.1 | None | SRR12006623 | Sensitive | lineage1.2.1.2.1 | None | SRR12006620 | Sensitive | lineage1.2.1.2.1 | None | SRR12006658 | Sensitive | lineage1.2.1.2.1 | None | SRR12006641 | Sensitive | lineage1.2.1.2.1 | None | SRR12006653 | Sensitive | lineage1.2.1.2.1 | None | SRR12006694 | Sensitive | lineage1.2.1.2.1 | None | SRR13591418 | Sensitive | lineage1.2.1.2.1 | None | SRR12006709 | Sensitive | lineage1.2.1.2.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR12416843 | MDR-TB | lineage1.2.1.2.1 | None | SRR12882756 | Sensitive | lineage1.2.1.2.1 | None | SRR13591413 | Sensitive | lineage1.2.1.2.1 | None | SRR12882755 | Sensitive | lineage1.2.1.2.1 | None | SRR14519850 | Sensitive | lineage1.2.1.2.1 | None | SRR14519716 | Sensitive | lineage1.2.1.2.1 | None | SRR14520004 | HR-TB | lineage1.2.1.2.1 | None | SRR1573710 | Sensitive | lineage4.4.2 | None | SRR16058343 | HR-TB | lineage1.2.1.2.1 | None | SRR1573705 | Sensitive | lineage4.4.2 | None | SRR1573724 | Sensitive | lineage4.4.2 | None | SRR16058463 | Sensitive | lineage1.2.1.2.1 | None | SRR16058649 | Sensitive | lineage1.2.1.2.1 | None | SRR16058475 | Sensitive | lineage1.2.1.2.1 | None | SRR16058514 | Sensitive | lineage1.2.1.2.1 | None | SRR16058504 | HR-TB | lineage1.2.1.2.1 | None | SRR16089907 | Sensitive | lineage1.2.1.2.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR17658565 | Other | lineage3 | None | SRR26056430 | Sensitive | lineage1.2.1.2.1 | None | ERR11050892 | HR-TB | lineage1.2.1.2.1 | None | SRR21713557 | Sensitive | lineage1.2.1.2.1 | None | SRR27450315 | Sensitive | lineage1.2.1.2.1 | None | SRR21732439 | Sensitive | lineage1.2.1.2.1 | None | SRR21732532 | Sensitive | lineage1.2.1.2.1 | None | SRR22251801 | Sensitive | lineage1.2.1.2.1 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR6045218 | Sensitive | lineage1.2.1.2.1 | gb | SRR27450353 | Sensitive | lineage1.2.1.2.1 | None | ERR176643 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR212121 | HR-TB | None | ERR176751 | HR-TB | None | ERR212033 | HR-TB | None | SRR6824512 | HR-TB | lineage1.2.1.2.1 | cn | SRR7496552 | HR-TB | lineage1.2.1.2.1 | us | ERR4817010 | HR-TB | lineage1.2.1.2.1 | None | SRR3675574 | HR-TB | None | SRR3675571 | HR-TB | None | SRR3742665 | HR-TB | None | ERR502912 | Other | lineage2.2.1 | None | SRR7496478 | Sensitive | lineage1.2.1.2.1 | us | ERR3275373 | Sensitive | lineage1.2.1.2.1 | nl | SRR6153237 | Sensitive | lineage1.2.1.2.1 | ca |
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