EBG00000313339 - n.2342G>T
Drug resistance types
5 Sensitive
3 RR-TB
16 HR-TB
1 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 3 |
| lineage6.1.1 | 2 |
| 12 | |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage2.2.1.1 | 5 |
| lineage2.2.1 | 4 |
| lineage2.2.1;lineage1.1 | 1 |
| lineage4.8 | 1 |
| lineage3 | 3 |
| lineage4.6.2.2 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage4 | 2 |
| lineage4.3.3 | 1 |
| lineage4.3.1.1 | 1 |
| La2 | 1 |
| lineage4.2.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage6 | 1 |
| lineage1.1.2 | 1 |
| lineage3.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 45 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1172214 | HR-TB | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173788 | Other | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180225 | Pre-XDR-TB | lineage2.2.1;lineage1.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR19304109 | Other | lineage4.8 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR11082350 | MDR-TB | lineage4.6.2.2 | None | ERR176740 | HR-TB | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR6045267 | RR-TB | lineage4 | None | ERR4820660 | Sensitive | lineage3 | None | SRR3675571 | HR-TB | None | SRR5074710 | Sensitive | lineage4.3.3 | None | SRR5341470 | HR-TB | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR6046397 | Other | None | SRR6046616 | Other | lineage4.3.1.1 | None | ERR294266 | HR-TB | None | ERR502470 | RR-TB | lineage4.9 | None | ERR323039 | HR-TB | None | ERR502524 | HR-TB | La2 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR323053 | HR-TB | None | ERR3799304 | Other | lineage6.1.1 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796634 | Other | lineage4 | None | ERR3806588 | Other | lineage6 | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR736865 | HR-TB | None |
|---|
