lineage | Count |
---|---|
lineage4.9 | 12 |
La1.7;M.canetti;lineage4.9 | 2 |
La1.7.1;La1.7.X-unk4;lineage7 | 1 |
M.canetti;lineage4.9 | 3 |
lineage6.1.1 | 2 |
1 | |
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
La1.7;lineage4.9 | 2 |
lineage4.9;lineage7 | 4 |
lineage4.3.2;lineage4.9 | 1 |
lineage4.2;lineage4.6.3;lineage4.9 | 1 |
lineage4.9;lineage6.3 | 1 |
lineage2.1;lineage4.9;lineage6.3 | 1 |
lineage4.3.4 | 1 |
lineage2.2.1 | 2 |
La2;lineage4.9 | 1 |
lineage2.1;lineage4.9 | 1 |
lineage4.6.2.2 | 2 |
La2;lineage4.9;lineage9 | 1 |
lineage2.1;lineage4.9;lineage7 | 1 |
lineage3.1.2.1;lineage3.1.2.2 | 1 |
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
lineage4.6.3;lineage4.9 | 2 |
lineage4.9;lineage9 | 2 |
La1.2;La1.8.1 | 1 |
lineage3.1.2.2 | 1 |
La1.7.1;La1.7.X-unk4 | 1 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 53 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR736837 | Pre-XDR-TB | lineage4.9 | None |
SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None |
SRR3675461 | RR-TB | lineage4.9 | None |
ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None |
SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None |
ERR3799304 | Other | lineage6.1.1 | None |
ERR987722 | MDR-TB | None | |
ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None |
ERR212034 | HR-TB | La1.7;lineage4.9 | None |
ERR3445502 | Sensitive | lineage4.9;lineage7 | None |
ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None |
ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None |
ERR502524 | HR-TB | lineage4.9;lineage6.3 | None |
SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
ERR736817 | HR-TB | lineage4.3.4 | None |
SRR20969430 | Sensitive | lineage2.2.1 | None |
ERR323039 | HR-TB | La2;lineage4.9 | None |
SRR3675495 | Other | lineage2.1;lineage4.9 | None |
ERR13278785 | MDR-TB | lineage4.6.2.2 | None |
ERR181887 | Other | lineage4.9 | None |
ERR1063862 | HR-TB | lineage4.9 | None |
SRR6045399 | Other | M.canetti;lineage4.9 | None |
ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None |
SRR29096150 | Other | lineage4.9 | None |
SRR3675456 | RR-TB | lineage4.9;lineage7 | None |
SRR1183111 | HR-TB | lineage4.9 | None |
ERR176560 | HR-TB | La1.7;lineage4.9 | None |
SRR1180226 | HR-TB | lineage4.9 | None |
SRR3675539 | HR-TB | lineage4.9;lineage7 | None |
SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None |
SRR6046382 | Sensitive | lineage2.2.1 | None |
SRR29096410 | Other | lineage4.9 | None |
ERR11082350 | MDR-TB | lineage4.6.2.2 | None |
ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None |
SRR1172310 | HR-TB | lineage4.9 | None |
ERR9787014 | Other | lineage6.1.1 | None |
ERR387051 | Other | lineage4.9 | None |
SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
SRR6046577 | Other | lineage4.6.3;lineage4.9 | None |
SRR1174897 | MDR-TB | lineage4.9;lineage9 | None |
SRR7240033 | Other | La1.2;La1.8.1 | None |
ERR4798648 | MDR-TB | lineage3.1.2.2 | None |
ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None |
ERR4798504 | RR-TB | lineage3 | None |
SRR5341470 | MDR-TB | lineage4.9;lineage9 | None |
SRR3675449 | Other | M.canetti;lineage4.9 | None |
SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None |
SRR29097037 | Other | lineage4.9 | None |
SRR26159047 | Other | lineage4.6.3;lineage4.9 | None |
ERR1063858 | HR-TB | lineage4.9 | None |
SRR3675231 | MDR-TB | lineage4.9;lineage7 | None |